Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq255 87.8 3e-12 >seq255 Length=1490166 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || || |||||||||| | |||| ||||| | || || || |||||||||||||| || Sbjct 464651 GCCTTGTGGTGGTACTTTGTATCAAAAGGAGTTGAGTATTTGGATACAGTGTTTTTTATC 464710 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||| || || || ||| || || ||||| || ||||| | ||| ||||| Sbjct 464711 CTGAGGAAGAAAAACAACCAGGTTTCTTTCCTTCACGTGTACCATCACTGTACCATGTTC 464770 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || || | ||| | || || || ||| | ||||| || || Sbjct 464771 ACATTGTGGTGGATTGGAATCAAGTGGGTGGCAGGGGGCCA 464811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903062020278560