Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq31 109 7e-19 seq375 107 3e-18 seq387 105 9e-18 seq324 105 9e-18 seq6 105 9e-18 seq2456 104 3e-17 seq1844 104 3e-17 seq746 104 3e-17 seq470 104 3e-17 seq129 104 3e-17 seq71 95.1 2e-14 seq26 89.7 7e-13 seq153 87.8 2e-12 seq758 86.0 8e-12 seq52 86.0 8e-12 seq314 82.4 1e-10 seq48 82.4 1e-10 >seq31 Length=11202321 Score = 109 bits (120), Expect = 7e-19 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 |||| ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| Sbjct 1386078 CTTACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 1386019 Query 8713 GATTCCCCGACGAGGAGCAG 8732 |||||||||||| |||| || Sbjct 1386018 GATTCCCCGACGGGGAGGAG 1385999 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1386073 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1386014 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 1386013 CCCGACGGGGAGG 1386001 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1386002 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1386061 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 1386062 TACTAACGAGGA 1386073 >seq375 Length=1960377 Score = 107 bits (118), Expect = 3e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 ||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 853600 ATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 853659 Query 8716 TCCCCGACGAGGAG 8729 ||||||||| |||| Sbjct 853660 TCCCCGACGGGGAG 853673 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 853602 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 853661 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 853662 CCCGACGGGGAGG 853674 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 853673 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 853614 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 853613 TACTAACGAGGAATT 853599 >seq387 Length=3314187 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 191277 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 191336 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 191337 CCCCGACGGGGAG 191349 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 230806 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 230747 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 230746 CCCGACGGGGAG 230735 Score = 102 bits (112), Expect = 1e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||||| |||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 197773 ATTCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 197832 Query 8716 TCCCCGACGAGGAG 8729 |||||||| ||||| Sbjct 197833 TCCCCGACAAGGAG 197846 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 191278 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 191337 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 191338 CCCGACGGGGAG 191349 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 230806 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 230747 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 230746 CCCGACGGGGAG 230735 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||| |||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 197772 CATTCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 197831 Query 11786 TTCCCCGACGAGGAGG 11801 ||||||||| |||||| Sbjct 197832 TTCCCCGACAAGGAGG 197847 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 230734 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 230793 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 230794 ATACTAACGAGGA 230806 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 191349 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 191290 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 191289 TACTAACGAGGA 191278 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 ||||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 197846 CTCCTTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 197787 Query 139413 TACTAACGAGGATTTTGGTA 139432 ||||||| |||| | |||| Sbjct 197786 TACTAACAAGGAATGCGGTA 197767 >seq324 Length=2124287 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||| |||||||||||||| ||||| |||| ||||| |||||||||||||||||||||| Sbjct 1973420 TTCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACACGGGAGACCGGGGTTCGATT 1973479 Query 8717 CCCCGACGAGGAG 8729 ||||||| ||||| Sbjct 1973480 CCCCGACAAGGAG 1973492 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||| |||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||| Sbjct 1973421 TCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACACGGGAGACCGGGGTTCGATTC 1973480 Query 11789 CCCGACGAGGAGG 11801 |||||| |||||| Sbjct 1973481 CCCGACAAGGAGG 1973493 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 ||||| |||||||| |||||||||||||||||||| |||| |||||||| | ||||||| Sbjct 1973492 CTCCTTGTCGGGGAATCGAACCCCGGTCTCCCGTGTGACAGGCGGGGATACTCACCACTA 1973433 Query 139413 TACTAACGAGGA 139424 ||||||| |||| Sbjct 1973432 TACTAACAAGGA 1973421 >seq6 Length=12818899 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 2563894 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 2563953 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 2563954 CCCCGACGGGGAG 2563966 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2560850 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2560909 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2560910 CCCGACGGGGAG 2560921 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 2560849 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 2560908 Query 11788 CCCCGACGAGGAG 11800 |||||||| |||| Sbjct 2560909 CCCCGACGGGGAG 2560921 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2563895 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2563954 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2563955 CCCGACGGGGAG 2563966 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2560921 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2560862 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2560861 TACTAACGAGGA 2560850 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2563966 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2563907 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2563906 TACTAACGAGGA 2563895 >seq2456 Length=20424 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 4556 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4497 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 4496 CCCGACGAGGAG 4485 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 20127 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 20068 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 20067 CCCGACGAGGAG 20056 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 4556 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4497 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 4496 CCCGACGAGGAG 4485 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 20127 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 20068 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 20067 CCCGACGAGGAG 20056 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 4485 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4544 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 4545 TACTAACGGGGA 4556 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 20056 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 20115 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 20116 TACTAACGGGGA 20127 >seq1844 Length=33621 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 291 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 350 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 351 CCCGACGAGGAG 362 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 9060 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 9119 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 9120 CCCGACGAGGAG 9131 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 26123 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 26064 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 26063 CCCGACGAGGAG 26052 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 291 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 350 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 351 CCCGACGAGGAG 362 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 9060 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 9119 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 9120 CCCGACGAGGAG 9131 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 26123 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 26064 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 26063 CCCGACGAGGAG 26052 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||| |||||||||||| || ||||| |||| ||||| | |||||||||||||||||||| Sbjct 32996 TTCCCCGTTAGTATAGTAGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 32937 Query 8717 CCCCGACGAGGAG 8729 ||||||||||||| Sbjct 32936 CCCCGACGAGGAG 32924 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 362 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 303 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 302 TACTAACGGGGA 291 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 9131 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 9072 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 9071 TACTAACGGGGA 9060 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 26052 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26111 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 26112 TACTAACGGGGA 26123 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| |||||||||||| || ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 32995 TCCCCGTTAGTATAGTAGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 32936 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 32935 CCCGACGAGGAG 32924 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | || |||| Sbjct 32924 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACTACTA 32983 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 32984 TACTAACGGGGA 32995 >seq746 Length=847536 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 807550 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 807491 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 807490 CCCGACGGGGAG 807479 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 807550 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 807491 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 807490 CCCGACGGGGAGG 807478 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 807479 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 807538 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 807539 TACTAACGAGGAT 807551 Score = 96.9 bits (106), Expect = 5e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 840440 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 840499 Query 8718 CCCGACGA 8725 |||||||| Sbjct 840500 CCCGACGA 840507 Score = 93.3 bits (102), Expect = 6e-14 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 840440 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 840499 Query 11789 CCCGACGA 11796 |||||||| Sbjct 840500 CCCGACGA 840507 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 139357 TCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATACT 139416 |||||||||| |||||||||||||||||| | |||| |||||||| | ||||||||||| Sbjct 840507 TCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACT 840448 Query 139417 AACGAGGA 139424 |||| ||| Sbjct 840447 AACGGGGA 840440 >seq470 Length=2777046 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2749036 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2748977 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 2748976 CCCGACGAGGAG 2748965 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2770908 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACCCGGGAGACCGGGGTTCGATTC 2770967 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 2770968 CCCGACGAGGAG 2770979 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2749036 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2748977 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 2748976 CCCGACGAGGAG 2748965 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2770908 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACCCGGGAGACCGGGGTTCGATTC 2770967 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 2770968 CCCGACGAGGAG 2770979 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2748965 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2749024 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 2749025 TACTAACGGGGA 2749036 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2770979 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGGGTGACAGGCGGGGATACTCACCACTA 2770920 Query 139413 TACTAACGAGGA 139424 |||||||| ||| Sbjct 2770919 TACTAACGGGGA 2770908 >seq129 Length=5885081 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 567270 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 567329 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 567330 CCCGACGGGGAG 567341 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 567270 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 567329 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 567330 CCCGACGGGGAG 567341 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 567341 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 567282 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 567281 TACTAACGAGGA 567270 >seq71 Length=5144731 Score = 95.1 bits (104), Expect = 2e-14 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721 ||||||||||||||| ||||| |||| ||||| | | ||||||||||||||||||||||| Sbjct 1854259 CGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCAGGAGACCGGGGTTCGATTCCCCG 1854200 Query 8722 ACGAGGA 8728 ||||||| Sbjct 1854199 ACGAGGA 1854193 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 11734 CGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 11792 ||||||||||||||| ||||| |||| ||||| | | ||||||||||||||||||||||| Sbjct 1854259 CGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCAGGAGACCGGGGTTCGATTCCCCG 1854200 Query 11793 ACGAGGA 11799 ||||||| Sbjct 1854199 ACGAGGA 1854193 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 139354 TCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTAT 139413 ||||||||||||| |||||||||||||||| | | |||| |||||||| | |||||||| Sbjct 1854193 TCCTCGTCGGGGAATCGAACCCCGGTCTCCTGCGTGACAGGCGGGGATACTCACCACTAT 1854252 Query 139414 ACTAACG 139420 ||||||| Sbjct 1854253 ACTAACG 1854259 >seq26 Length=11862744 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| || | ||||| |||||||||||||||| |||| Sbjct 9752701 TCCTCGTTAGTATAGTGGTTAGTATCCCTGCCTGTCATGCGGGAGACCGGGGTTCAATTC 9752642 Query 8718 CCCGACGAGGAG 8729 |||||| |||| Sbjct 9752641 CCCGACAGGGAG 9752630 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| || | ||||| |||||||||||||||| |||| Sbjct 9752701 TCCTCGTTAGTATAGTGGTTAGTATCCCTGCCTGTCATGCGGGAGACCGGGGTTCAATTC 9752642 Query 11789 CCCGACGAGGAGG 11801 |||||| ||||| Sbjct 9752641 CCCGACAGGGAGG 9752629 >seq153 Length=7306735 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||| |||||||||||||| ||||| ||| ||||| | |||||||| ||||||||||| Sbjct 3174207 TTCCTTGTTAGTATAGTGGTGAGTATCCCCACCTGTCACGCGGGAGACTGGGGTTCGATT 3174148 Query 8717 CCCCGACGAGGAG 8729 ||| ||| ||||| Sbjct 3174147 CCCTGACAAGGAG 3174135 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||| |||||||||||||| ||||| ||| ||||| | |||||||| |||||||||||| Sbjct 3174206 TCCTTGTTAGTATAGTGGTGAGTATCCCCACCTGTCACGCGGGAGACTGGGGTTCGATTC 3174147 Query 11789 CCCGACGAGGAGG 11801 || ||| |||||| Sbjct 3174146 CCTGACAAGGAGG 3174134 >seq758 Length=530507 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| ||||||||||||||| ||||| |||| ||||| | | |||| | |||||||||||| Sbjct 120715 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCCGGAGTCTGGGGTTCGATTC 120774 Query 8718 CCCGACGAGGAG 8729 ||||||||| || Sbjct 120775 CCCGACGAGAAG 120786 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| ||||||||||||||| ||||| |||| ||||| | | |||| | |||||||||||| Sbjct 120715 TCCCCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCCGGAGTCTGGGGTTCGATTC 120774 Query 11789 CCCGACGAGGAG 11800 ||||||||| || Sbjct 120775 CCCGACGAGAAG 120786 >seq52 Length=8937789 Score = 86.0 bits (94), Expect = 8e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 |||| |||| |||||||||||||| ||||| |||| ||||| | | ||||||| |||||| Sbjct 2398418 CTTACTCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCAGGAGACCAGGGTTC 2398477 Query 8713 GATTCCCCGACGAGGAGCAG 8732 ||||||||| | |||| || Sbjct 2398478 AATTCCCCGATGGGGAGAAG 2398497 >seq314 Length=4067486 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8666 AGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGA 8725 ||||||||||| ||||| |||| ||||| | ||||||||||||||| ||||||| ||| | Sbjct 768939 AGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTTGATTCCCTGACAA 768880 Query 8726 GGAGC 8730 ||||| Sbjct 768879 GGAGC 768875 >seq48 Length=9528703 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 8660 CTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCC 8719 ||| ||| ||||||||||||||| || | ||||| || |||||||| |||||||||||| Sbjct 7086843 CTCATTAATATAGTGGTTAGTATCCCTGCCTGTCACATGGGAGACCCGGGTTCGATTCCT 7086784 Query 8720 CGACGAGGAG 8729 ||| |||||| Sbjct 7086783 CGATGAGGAG 7086774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652592467324240