Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1038 185 1e-40
seq14539 179 5e-39
seq644 179 5e-39
seq387 179 5e-39
seq180 167 3e-35
seq498 132 7e-25
>seq1038
Length=538072
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 363417 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 363470
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| || ||||||| |||
Sbjct 363471 GGCATCATGAACTCTTTCGTCAACGACATTTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 363530
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||||| | ||||| ||||||||
Sbjct 363531 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGT 363590
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 363591 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 363639
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 369187 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 369134
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| || ||||||| |||
Sbjct 369133 GGCATCATGAACTCTTTCGTCAACGACATTTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 369074
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | |||||| | ||||| ||||||||
Sbjct 369073 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGT 369014
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 369013 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 368965
>seq14539
Length=6588
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 2262 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2209
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 2208 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 2149
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 2148 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 2089
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 2088 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 2040
>seq644
Length=862561
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 290590 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 290537
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 290536 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 290477
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 290476 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 290417
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 290416 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 290368
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 364637 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 364584
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 364583 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 364524
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 364523 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 364464
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 364463 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 364415
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 452574 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 452627
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 452628 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 452687
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 452688 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 452747
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 452748 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 452796
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 467533 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 467586
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 467587 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 467646
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 467647 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 467706
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 467707 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 467755
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 477645 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 477592
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 477591 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 477532
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 477531 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 477472
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 477471 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 477423
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 505889 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 505942
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 505943 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 506002
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 506003 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 506062
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 506063 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 506111
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 510826 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 510879
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 510880 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 510939
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 510940 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 510999
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 511000 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 511048
Score = 158 bits (174), Expect = 2e-32
Identities = 175/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||| || ||||| |||||||||||||| || || |||| ||| |||| ||
Sbjct 40086 ATCTATAAAGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCCTCCAAGGCC 40139
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| |||||||| || ||||| | ||||| |||| ||||||| ||||||
Sbjct 40140 ATGAGCATCATGAATTCCTTTGTGACAGACATCTTCGAGCGCATCGCGGGCGAGGCGTCG 40199
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || |||||||||| || ||| | || ||||||||||| ||||||
Sbjct 40200 CGCCTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTG 40259
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 40260 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 40311
Score = 158 bits (174), Expect = 2e-32
Identities = 175/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||| || ||||| |||||||||||||| || || |||| ||| |||| ||
Sbjct 55949 ATCTATAAAGTGCTGAAGCAGGTGCACCCGGACAC-----GGGCATC-TCCTCCAAGGCC 56002
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| |||||||| || ||||| | ||||| |||| ||||||| ||||||
Sbjct 56003 ATGAGCATCATGAATTCCTTTGTGACAGACATCTTCGAGCGCATCGCGGGCGAGGCGTCG 56062
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || |||||||||| || ||| | || ||||||||||| ||||||
Sbjct 56063 CGCCTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTG 56122
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 56123 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 56174
>seq387
Length=3314187
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 76235 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 76182
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 76181 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 76122
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 76121 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 76062
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 76061 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 76013
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 289516 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 289463
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 289462 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 289403
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 289402 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 289343
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 289342 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 289294
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 321395 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 321342
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 321341 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 321282
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 321281 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 321222
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 321221 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 321173
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 351591 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 351538
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 351537 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 351478
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 351477 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 351418
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 351417 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 351369
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 381450 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 381397
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 381396 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 381337
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 381336 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 381277
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 381276 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 381228
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 388855 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 388908
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 388909 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 388968
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 388969 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 389028
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 389029 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 389077
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 84961 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 84908
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 84907 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 84848
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 84847 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGT 84788
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 84787 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 84739
Score = 140 bits (154), Expect = 5e-27
Identities = 127/160 (79%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 724983 AACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGC 725042
|||||||| ||||||||||| |||| ||||||| |||||| |||||||||| |
Sbjct 288974 AACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGCCTGGCGCAC 288915
Query 725043 TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATG 725102
| |||||||||| || ||| | || ||||||||||| |||||||||||| | ||
Sbjct 288914 TACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGCCTGCTGCTG 288855
Query 725103 CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 288854 CCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 288815
>seq180
Length=3519559
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||| |||||||| |||| | ||| || |||| |||||
Sbjct 1263600 TACAAGGTGCTGAAGCAAGTGCACCCGGACACCGGT-----ATC-TCGTCCAAGGCCATG 1263653
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || || |||||||| |||| ||||||| |||||| |||
Sbjct 1263654 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 1263713
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 1263714 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 1263773
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 1263774 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 1263822
Score = 152 bits (168), Expect = 7e-31
Identities = 172/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 1211315 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 1211368
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||| || ||||| || ||||| |||| ||||||| |||||| |||
Sbjct 1211369 GGCATCATGAATTCCTTTGTTAATGACATCTTCGAGCGCATCGCAGGCGAGGCTTCGCGC 1211428
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 1211429 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGT 1211488
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| |||||||| | |||||| || |||||||||||||
Sbjct 1211489 CTGCTGCTGCCCGGGGAACTGGCTAAGCACGCTGTGTCCGAGGGCACCA 1211537
>seq498
Length=2542268
Score = 132 bits (146), Expect = 7e-25
Identities = 280/411 (68%), Gaps = 20/411 (5%)
Strand=Plus/Minus
Query 1455905 CTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAG 1455964
|||| ||||| || || || |||| || |||||| ||| || |||| |||
Sbjct 2187055 CTTTCTTCGCAGCGAGTGACAGCATAGTCAATGAGAACTTGGAG---CGATTTAGCCAAG 2186999
Query 1455965 AGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCC 1456024
| || ||| | ||||||| || | || || || ||||| || ||||| |||||||| |
Sbjct 2186998 AAGTTCAAGTCACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATAC 2186939
Query 1456025 ACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACC 1456084
| ||||||| ||| ||||| || ||||||||| | || || | |||| |||
Sbjct 2186938 ATTCTGAAATGTACAGTCTCCTTATTGACACCTACATTAAAGATTCTAAGGAGAGGGAGT 2186879
Query 1456085 ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGA 1456144
| ||||| || || || ||| |||| || |||| ||| |||||||||||||| ||
Sbjct 2186878 ATCTCTTCATTGCTATAGAAACGATGCCTTCTGTGAAGAAGAAGGCCGACTGGGCCTTGC 2186819
Query 1456145 AGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAG--CGGCTCGTCGGCTTTGCC 1456199
||||| |||| |||| | ||| | | ||| || | |||| |||||||
Sbjct 2186818 GTTGGATTTGGGACAAAGAGG----CTACA---TACAGAGAACGTGTTGTCGCCTTTGCC 2186766
Query 1456200 G-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGC 1456258
| ||| || |||||||| ||| || |||| | || || |||||||||||||
Sbjct 2186765 GCCGTGGAAGGCATCTTCTTC---GGTTCTTTCACATCAATATTCTGGCTCAAGAAGCAG 2186709
Query 1456259 GGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309
|| || |||||||| ||| ||| ||| || ||||||| | |||||
Sbjct 2186708 GGACTGATGCCCGGCCTT-ACATTTTCCAATGAGCTTATCAGCAGAGACGA 2186659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7174828812717202
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |