Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq657 82.4 1e-10
>seq657
Length=1571634
Score = 82.4 bits (90), Expect = 1e-10
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || || ||||||| |||||||| || | |||| | || || || ||
Sbjct 950075 CTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCC 950016
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
|| || | ||||| |||||| || || | ||| |||||||||||||| || || ||
Sbjct 950015 CAGGTTTTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTGCC 949956
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419
|||||| ||||| |||| | || || | |||||
Sbjct 949955 CGTCTCTGTCTGAGATTCAATGATGGCATACCAAA 949921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627789257781600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |