Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq309 179 9e-40 seq6 168 2e-36 seq154 161 2e-34 seq423 158 3e-33 seq38 154 3e-32 seq70 131 4e-25 seq3 129 1e-24 seq120 125 2e-23 seq37 125 2e-23 seq28 123 6e-23 seq31 122 2e-22 seq366 113 1e-19 seq222 107 4e-18 seq4 105 2e-17 seq319 96.9 8e-15 seq145 96.9 8e-15 seq410 93.3 1e-13 seq81 91.5 3e-13 seq872 84.2 5e-11 >seq309 Length=1536079 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | ||||| ||||| |||||||| ||||| || || || || | | || Sbjct 714828 ACGAAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATATTGTATTCAGACAAAGT 714769 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||||||||| || |||||||| || | || || |||||||||| || Sbjct 714768 ACGGCCATCTTCCAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGATCAGGAGGAATACC 714709 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| || || ||||| || ||||| ||| |||||||||||| Sbjct 714708 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTGTCCGAGGGTTCAACCTCGAG 714649 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| || || | |||||| Sbjct 714648 CGTGATGGTTTTCCCCGTGAGGGTCTTCACGAAAATCTGCAT 714607 Score = 170 bits (188), Expect = 4e-37 Identities = 172/222 (77%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | ||||| ||||| |||||||| ||||| || || || || ||| | Sbjct 713462 ACGAAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATATTGTATTCA--AAG--T 713407 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||||||||| || || ||||| || | ||| || |||||||||| || Sbjct 713406 ACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATACC 713347 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| || | ||||| || ||||| ||| |||||||||||| Sbjct 713346 TTCCTTATCCTGGATCTTGGCCTTTATATTTTCTATCGTGTCCGAGGGTTCAACCTCGAG 713287 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| || || | |||||| Sbjct 713286 CGTGATGGTTTTCCCCGTGAGGGTCTTCACGAAAATCTGCAT 713245 >seq6 Length=12818899 Score = 168 bits (186), Expect = 2e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 2580487 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 2580428 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || |||||||| || | || || |||||| Sbjct 2580427 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATACCCTCTTTGTCC 2580368 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || || |||||||||||| | || ||||| || ||||| ||| Sbjct 2580367 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCTAGGGTGATGGTC 2580308 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || | || || || || | ||||||| Sbjct 2580307 TTACCAGTTAAGGTTTTCACGAAGATCTGCATT 2580275 >seq154 Length=6791889 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | ||||| ||||| |||||||| | ||| || | || || | | || Sbjct 1707860 ACGAAGTCTCAACACAAGATGAAGGGTGGACTCCTATTGAATACTGTAGTCAGACAAAGT 1707801 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||||||||| || |||||| | || | || || |||||||||| ||| Sbjct 1707800 ACGGCCATCTTCCAGCTGCTTACCAGCGAAGCTCAGCCTCTGCTGATCAGGAGGAATTCC 1707741 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||| ||||||||||| || || ||||| || ||||| ||| |||||||||||| Sbjct 1707740 TTGCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTGTCCGAGGGTTCAACCTCGAG 1707681 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || || |||||||| ||||| || || | |||||| Sbjct 1707680 CATGATGGTTTTCCCCGTGAGGGTCTTCACGAATATCTGCAT 1707639 >seq423 Length=2413410 Score = 158 bits (174), Expect = 3e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | ||||| ||||| |||||||| ||||| || || || || | | || Sbjct 7508 ACGAAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATATTGTATTCAGACAAAGT 7449 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||||||||| || | |||||| | | || || |||||||||| ||| Sbjct 7448 ACGGCCATCTTCCAGCTGCTTACCAGTGAAGATCCGCCTCTGCTGATCAGGAGGAATTCC 7389 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| |||||||||| || || ||||| |||||||| ||| ||||| ||| || Sbjct 7388 TTCCTTAGCCTGGATCTTGGCCTTTACATTTTCTATGGTGTCTGAGGGTTCAATCTCAAG 7329 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || || || || ||||| || || | |||||| || Sbjct 7328 TGTGATGGTTTTCCCTGTAAGGGTCTTCACGAAGATCTGCATCTT 7284 >seq38 Length=12148825 Score = 154 bits (170), Expect = 3e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| ||||| ||||| |||||||| | ||| || | || || | | || Sbjct 10461003 ACGAAGTCTCGACACAAGATGAAGGGTGGACTCCTATTGAATACTGTAGTCAGACAAAGT 10461062 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||||||||| || |||||| | || | || || |||||||||| ||| Sbjct 10461063 ACGTCCATCTTCCAGCTGCTTACCAGCGAAGCTCAGCCTCTGCTGATCAGGAGGAATTCC 10461122 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| |||||||||| || || ||||| || ||||| || |||||||||||| Sbjct 10461123 TTCCTTATCCTGGATCTGGGCCTTTACATTTTCTATAGTGTCCGAAGGTTCAACCTCGAG 10461182 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || ||| | || ||||| ||||| | || ||| || Sbjct 10461183 CGTGATGGTTTTCCCCATAAGGGTCTTCACAAAAATCTTCATCTT 10461227 >seq70 Length=7483708 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | ||||||||||| |||||||| ||||| | ||||| | ||| Sbjct 5585707 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTTTAATCTGACAGGGTGAGGCGATCC 5585766 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| || || || || || ||||| || || | |||||||||| Sbjct 5585767 TCCAGCTGTTTGCCAGCAAATATCAGCTTCTGCTGGTCTGGTGGGATGTCTTCCTTGTCT 5585826 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| || ||||| |||||||| ||| Sbjct 5585827 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTAGGCTCGACCTCAAGAGTGATGGTC 5585886 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || ||||| ||||| | |||||| || Sbjct 5585887 TTGCCCGTCAGGGTCTTCACAAAGATCTGCATGTT 5585921 >seq3 Length=5748141 Score = 129 bits (142), Expect = 1e-24 Identities = 159/216 (74%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||||||||||| |||||||| || || | ||||| | ||||| Sbjct 3927311 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCA 3927370 Query 210963 TCCAGCTGCTTGCCTGCGAAG-ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||||||||||| || || || || | || ||||| || || | |||||||| || Sbjct 3927371 CCCAGCTGCTTGCTGGCAAATTATCAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTATC 3927430 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||||||| || || || |||||||||||| || ||||| |||||||| | Sbjct 3927431 TTGGATCTTGACCTTGACATTCTCGATGGTGTCACTAGGCTCGACCTCTAGAGTGATGTT 3927490 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| || || || ||||| ||||| | |||||| || Sbjct 3927491 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGTT 3927526 >seq120 Length=4857412 Score = 125 bits (138), Expect = 2e-23 Identities = 146/194 (75%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 210914 AAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTT 210973 |||| |||||||||| |||||||| || |||| || || | ||||| ||||||||||| Sbjct 3874441 AAGA-TGGACTCTTTCTGGATGTTGTAGTCCGACAGAGTGCCGCCATCCTCCAGCTGCTT 3874383 Query 210974 GCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTG 211033 ||| || || | || | || |||||||| | | ||||||||||| |||||||| Sbjct 3874382 GCCAGCAAATGTCAGCCTCTGCTGGTCAGGTAGGATGCCTTCCTTGTCTTGGATCTTAGC 3874323 Query 211034 TTTCACGTTTTCGATGGTGTCA--GAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || || | |||||||||| |||| | ||||| |||||||| ||||| ||| | Sbjct 3874322 CTTGACATTCTTGATGGTGTCACTGAGC--TAGACCTCAAGAGTGATGGTCTTGCCCCTC 3874265 Query 211092 AGAGTCTTTACAAA 211105 || ||||| || || Sbjct 3874264 AGGGTCTTCACGAA 3874251 >seq37 Length=11501336 Score = 125 bits (138), Expect = 2e-23 Identities = 157/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||| |||| ||||||| | || | ||| || | |||||| Sbjct 11476676 AGGACCAGGTGCAGGGTGGACCCTTTCTGGATGT---AGTCAGAAAGAGTGCGGCCATCT 11476732 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| | ||||| || ||||| |||||||| | | || || | ||| Sbjct 11476733 TCCAGCTGCTTGCCCGAAAAGATGAGTCGTTGCTGGTCAGGGAGGATGCCCTCTTCATCC 11476792 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||| ||| || ||||| || ||||| ||| Sbjct 11476793 TGGATCTTGGCCTTGACATTCTCGATGGTATCACTAGGCTCCACCTCTAGGGTGATGGTC 11476852 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || | || || ||||| || || | |||||||| Sbjct 11476853 TTGCTGGTCAGGGTCTTCACGAAGATTTGCATTTT 11476887 >seq28 Length=9942386 Score = 123 bits (136), Expect = 6e-23 Identities = 188/260 (72%), Gaps = 12/260 (5%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||||||||||| ||||||||||| || | ||||| | |||||| Sbjct 239170 AGCACTAGGTGCAGGGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTGCAGCCATCT 239229 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||| || || || || | || || ||||| | | ||||||||||| Sbjct 239230 -CCAGCTGCTTGCTGGCAAATATCAGCCTGTGCTGATCAGGTAGGATGCCTTCCTTGTCT 239288 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCA--GAGCTTTCAACCTCGAGAGTGATCG 211080 ||| |||| || || || | |||||||||| |||| || |||| ||||||| | Sbjct 239289 TGGGTCTTGGCCTTGACATTCTTGATGGTGTCACTGAGC--TCCACCT--GGAGTGATGG 239344 Query 211081 TCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTACTTGATGCTTCTTTTA 211140 |||| |||| | ||||| || || | |||||| | ||| | ||| || | | | Sbjct 239345 TCTTGTCCGTCAAGGTCTTCACCAAGATCTGCATGT--TGGCTGCTTCAT--TGCAGAGA 239400 Query 211141 AA-ATATTTTTGTTTTATTT 211159 || | |||||| |||||||| Sbjct 239401 AAGAAATTTTTATTTTATTT 239420 >seq31 Length=11202321 Score = 122 bits (134), Expect = 2e-22 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007 ||||| | |||||||||||||||||||| || ||||| || || || |||||||| || Sbjct 8040974 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 8041033 Query 211008 ACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACC 211067 | || || || ||||||||||| || || || |||||||||||| | || || Sbjct 8041034 ATGCCCTCTTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACT 8041093 Query 211068 TCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| ||||| || || || ||||| || || | ||||||||| Sbjct 8041094 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 8041143 Score = 114 bits (126), Expect = 3e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||||||||||| |||||||| || || | ||| || | |||||| Sbjct 8039956 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCT 8040015 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || || ||||| || || | || || || ||| Sbjct 8040016 TCCAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGGTCTGGGGGGATGCCCTCTTTATCC 8040075 Query 211023 TGGATCTT 211030 |||||||| Sbjct 8040076 TGGATCTT 8040083 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| || || ||| || |||||| Sbjct 7312643 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAAAAAGAGTGGGGCCATCT 7312584 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 | ||||||||||| || ||||| || | || ||||| ||||| | || || || || Sbjct 7312583 TTCAGCTGCTTGCTGGCAAAGATGAGTTGCTGCTGGTCGGGAGGCATGCCCTCTTTATCT 7312524 Query 211023 TGGATCTT 211030 |||||||| Sbjct 7312523 TGGATCTT 7312516 >seq366 Length=4409749 Score = 113 bits (124), Expect = 1e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | ||| ||||||| |||||||| || |||| ||||| ||||| Sbjct 1116222 AGCACCAGGTGCAAGGTGAACTCTTTCTGGATGTTGTAGTCCGACAGGGTGTGGCCATCC 1116281 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || || || || | || ||||| || || | |||||||| || Sbjct 1116282 TCCAGCTGCTTTCCGGCAAATATCAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTATCT 1116341 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| | || ||||| |||||||| ||| Sbjct 1116342 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTC 1116401 Query 211083 TT 211084 || Sbjct 1116402 TT 1116403 >seq222 Length=3706221 Score = 107 bits (118), Expect = 4e-18 Identities = 157/225 (70%), Gaps = 14/225 (6%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 || |||||| || ||||||||||| | |||||| | ||| || || | || | || Sbjct 1869467 ACAAAGTCTCAGCACAAGGTGAAGGGGGGACTCCTCTTGAATATTGTCGTCAGACTCAGT 1869526 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| |||||||||||| || || ||||| ||||||||| ||| Sbjct 1869527 GCGGCCACCTTCCAGCTGCTCACCAGCAAAGAT--------------CAGGAGGAATTCC 1869572 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| || || ||||| || ||||| ||| |||||||| ||| Sbjct 1869573 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGCTTCAACCTTGAG 1869632 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || || || || ||||| || | |||||| || Sbjct 1869633 CGTGATGGTTTTCCCTGTAAGGGTCTTCGTGAAAATCTGCATCTT 1869677 >seq4 Length=18898765 Score = 105 bits (116), Expect = 2e-17 Identities = 142/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||||||||||| |||||||| || || | ||| || | | |||| Sbjct 11612658 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCTATCT 11612717 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||| ||| | | || || | | |||||||| || | || || || || Sbjct 11612718 TCCAGCTGCTTG-CTG-GCAAATGAGTCACTACTGGTCAGG-GGGATGCCCTCTTTATCT 11612774 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||||||| || | ||| || ||||| ||| Sbjct 11612775 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTAGGCTCCATCTCTAGGGTGATGGTC 11612834 Query 211083 TTTCCCGTGAGAGT 211096 || || || || || Sbjct 11612835 TTGCCAGTCAGGGT 11612848 >seq319 Length=3946259 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/196 (73%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT--CCATCTTCCA 210966 ||||| | ||||||||||| |||||||| || || | || | | | |||||||||| Sbjct 689850 AGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAG--TACATAGCCATCTTCCA 689907 Query 210967 GCTGCTTGCCTG-CGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||| || |||| | || || || | ||||||| ||| || | ||||||||||| ||| Sbjct 689908 GCTG-TTTCCTGACAAATATCAGTCTCTGTTGGTGAGGTGGGATGCCTTCCTTGTCTTGG 689966 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTG--TCAGAGCTTTCAACCTCGAGAGTGATCGTCT 211083 ||||| || || || || || ||| || | |||| ||||| |||||||| ||| Sbjct 689967 ATCTTAGTCTTGACATTCTCAATAGTGTCTCTGGGCTT--GACCTCAAGAGTGATGGTCA 690024 Query 211084 TTCCCGTGAGAGTCTT 211099 | | || |||||||| Sbjct 690025 TGCTTGTCAGAGTCTT 690040 >seq145 Length=4974917 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||| | ||| | |||||| |||||||||||||||||||| || ||||| Sbjct 2387806 TTCTGAATGTTGTGATCAGAAAGGGTGTAGCCATCTTCCAGCTGCTTGCCAGCAAAGATG 2387747 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || | || |||||||| | | || | || ||||||||||| ||||| || || Sbjct 2387746 AGCCTCTGCTGGTCAGGGGTTATGCCCTTTTTATCCTGGATCTTGGCCTTCACATTCTCA 2387687 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 |||||||| | || ||||| || ||||| || || || || ||||| ||||| Sbjct 2387686 GTGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTGTTGTGAGTCAGGGTCTTCACAAAG 2387627 Query 211107 ACCTGCATTTT 211117 | | |||||| Sbjct 2387626 ATTTTCATTTT 2387616 >seq410 Length=930769 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||||||||| || || || |||||||||||| | || ||||| Sbjct 638447 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCA 638388 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| ||||| || ||||| ||||| | |||||| Sbjct 638387 AGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 638344 >seq81 Length=7769405 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/142 (75%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||| ||||||| |||||||| ||||| | ||| || |||||| Sbjct 54602 AGGACCAGGTGCAGGGTG-ACTCTTTCTGGATGTTGTAATCAGAAAGTGTGG--CCATCT 54546 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTT---GGTCAGGAGGAACTCCTTCCTTG 211019 ||||||||||||||||| ||||| || || || | ||| || | || || || Sbjct 54545 TCCAGCTGCTTGCCTGCAAAGATGAGTCGCTGCTGGGGGTGGGGGGCGGTGCCCTCTTTA 54486 Query 211020 TCCTGGATCTTTTGTTTCACGT 211041 ||||||||||| | ||||||| Sbjct 54485 TCCTGGATCTTGTCCTTCACGT 54464 >seq872 Length=978185 Score = 84.2 bits (92), Expect = 5e-11 Identities = 140/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||| | | ||||| | |||||||||||| ||||| || || || || | | || Sbjct 165136 ACGAAGTTTCAACACAAGATAAAGAGTGGACTCCTTTTGAATTTTGTAGTCAGACAAAGT 165077 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||||||||| || || | ||| | | || | |||||||||| || Sbjct 165076 ACAGCCATCTTCCAGCTGCTTACCAGC-AGGATCAACCTCTGCTCATCAGGAGGAATCCC 165018 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| || | |||| || | ||||| || |||| ||| |||| ||| ||| Sbjct 165017 CTCCTTACCCCGATTCTTGGCCTTTGCATTTTCTATAGTGTGTGAGGGTTCATCCTGGAG 164958 Query 211073 AGTGATCGTCTTTCCCGTGAG 211093 | ||| | ||| || || || Sbjct 164957 CGGGATGGCCTTCCCTGTAAG 164937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158692772594165