Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq457 96.9 1e-15
>seq457
Length=2943904
Score = 96.9 bits (106), Expect = 1e-15
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168
||||| || ||||||||||| | || | || |||||||| | |||| || |||| ||
Sbjct 1188328 ATGGCACTGCCTCCCTGCCATGCCCTCTGTCAGTTCTATGT-GGTGAATGGGGAGCTGTC 1188270
Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228
||||| | || |||||||| | |||||| | ||||||| || |||||||| |||||
Sbjct 1188269 TTGCCAGCTTTACCAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTTAACATCGCCAG 1188210
Query 52229 CTATTCCTTGCTGACGCATCTGATTGC 52255
|||| || |||| || | |||||||
Sbjct 1188209 CTATGCCCTGCTCACCTACATGATTGC 1188183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190026199243810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |