Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1304636 84.2 2e-11 >seq1304636 Length=3081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| |||||||||||||| || || || || || | ||||||||| ||| || |||| Sbjct 1881 CCTCATCTCTGCTGATAAGCTCATTGGAGAAGGTGAGGCCGGGCATCAGTCCCCGCTTCT 1822 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| ||||| | || || || || || ||||| || ||||| |||| ||||| | Sbjct 1821 TGAGCCAGAATATTGATGCAAAGGAGCCCGAGAAGAAGATCCCCTCCACGGCAGCAAAGG 1762 Query 17106 C 17106 | Sbjct 1761 C 1761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 508086626087040