Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1329907 98.7 8e-16 >seq1329907 Length=3381 Score = 98.7 bits (108), Expect = 8e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| | ||| | |||| ||| ||||| || || | | ||||| || || || | ||| Sbjct 459 GATCTTCCCCTGATGGCACTGCCTCCTTGCCATGCACTCTGTCAATTCTATGTGGTAAAT 518 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 || ||| | || |||||| | |||||||| || || |||||||| | || || || ||| Sbjct 519 GGGGAACTGTCTTGCCAACTTTACCAGAGGTCAGGAGATATGGGTTTGGGTGTGCCCTTC 578 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACAT 19111 |||||||| | ||||| || ||||||||||| Sbjct 579 AACATTGCCAGCTATGCCCTCCTTACCTACAT 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392384964563760