Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1455147 96.9 6e-15 >seq1455147 Length=9269 Score = 96.9 bits (106), Expect = 6e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 ||||||||||| |||||| | |||||||| |||||||| || |||||| | |||||||| Sbjct 7883 GCATTTTTTGGGGCTCAGATGAATTCTTTCATCCATGTGATCATGTACTCCTATTATGGA 7942 Query 52117 ATGGCCGC-TTGTGGTCCTATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175 || | || || | ||| | |||||| ||||| |||||||| || || ||||| || Sbjct 7943 CTGACTGCATTCGGCCCCTGGATCCAGAAA-TATCTTTGGTGGAAGCGATACCTTACCAT 8001 Query 52176 AATGCAGTTGGT 52187 ||||| |||| Sbjct 8002 GCTGCAGCTGGT 8013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 906323901365120