Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1391428 104 2e-17 >seq1391428 Length=4510 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 15884 CTTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATT 15943 || |||||||| ||| | | || ||||||||| | | | || ||| |||| | Sbjct 2656 CTCTAAAAATCTGCATCCAAGGTGAAGACATTATCTGTGGTTTCTGCCATGACTGCAAAG 2715 Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| ||| ||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct 2716 CGCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAACGAAATGTTT 2775 Query 16004 TCCATAAAATCAAAAGGATTTTTTG 16028 |||||||||||||| ||||||| || Sbjct 2776 TCCATAAAATCAAAGGGATTTTCTG 2800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454058853180800