Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1329907 89.7 4e-13 >seq1329907 Length=3381 Score = 89.7 bits (98), Expect = 4e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||| ||||||| || ||| || || ||||| || || | || Sbjct 458 AGATCTTCCCCTGATGGCACTGCCTCCTTGCCATGCACTCTGTCAATTCTATGTGGTAAA 517 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||| |||| || ||| | || || | || | |||||||| ||||||| || || Sbjct 518 TGGGGAACTGTCTTGCCAACTTTACCAGAGGTCAGGAGATATGGGTTTGGGTGTGCCCTT 577 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 ||| ||||| || ||||| || ||||| || ||||||||||| Sbjct 578 CAACATTGCCAGCTATGCCCTCCTTACCTACATGATTGCACA 619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392070666862960