Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1329907 86.0 1e-11 >seq1329907 Length=3381 Score = 86.0 bits (94), Expect = 1e-11 Identities = 99/130 (76%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 35567 GATCTTCACCTTATGGCTCTTCCTCCATGCCACATG-ACTGC-TCAATTTTATGTGGCTA 35624 ||||||| ||| ||||| || ||||| ||||| || ||| |||||| ||||||| | Sbjct 459 GATCTTCCCCTGATGGCACTGCCTCCTTGCCA--TGCACTCTGTCAATTCTATGTGGTAA 516 Query 35625 ATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCT 35684 |||| ||| |||| ||||| | || ||| | |||||| | || ||||| ||||||| Sbjct 517 ATGGGGAACTGTCTTGCCAACTTTACCAGAGGTCAGGAGATATGGGTTTGGGTGTGCCCT 576 Query 35685 TCAATATTGC 35694 |||| ||||| Sbjct 577 TCAACATTGC 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971045613292240