Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1329907 116 3e-21 >seq1329907 Length=3381 Score = 116 bits (128), Expect = 3e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||||||||||| ||| || |||| || || |||||||| |||||||| ||||| || | Sbjct 633 TCAGGCCCGTGATGTGTGCAATCATGTAGGTAAGGAGGGCATAGCTGGCAATGTTGAAGG 574 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || | ||||| || | ||||||||||| || ||||| ||||| ||||| Sbjct 573 GCACACCCAAACCCATATCTCCTGACCTCTGGTAAAGTTGGCAAGACAGTTCCCCATTTA 514 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 |||| || || ||||| | | || |||||||| || |||||| Sbjct 513 CCACATAGAATTGACAGAGTGCATGGCAAGGAGGCAGTGCCATC 470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420153166429440