Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1023260 87.8 1e-12 >seq1023260 Length=1473 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||||||| || || || |||||| | | || |||||||| ||||| || |||||||||| Sbjct 93 TGGCCTTCGCTGCCGTAGAAGGCATTTTCTTCTCTGGGTCGTTTGCTGCTATATTCTGGC 152 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| | ||||||||||| | | || || |||||| |||| ||| | || | Sbjct 153 TGAAGAAGAGAGGCCTCATGCCAGGACTCACTTTCTCAAACGAGCTGATCAGCAGGGATG 212 Query 22868 AAG 22870 ||| Sbjct 213 AAG 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 349885629461584