Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1252348 86.0 5e-12 >seq1252348 Length=2602 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 127155 CTTCAAAGGCTATTTAGGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGA 127214 |||| | || || || || |||||| | | || || ||||| ||||| ||||| | || Sbjct 1106 CTTCTAGGGTTACTTGGGTTGCCAAACCTTATCGGAAATGATCCAGTTTTACCTGGTGGA 1047 Query 127215 GGTCATGCCACAGGCAGAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGG 127274 || ||||| |||||||||| || || || || || || || || | || |||||||| Sbjct 1046 AGTGATGCCCCAGGCAGAAAGCCATGGCCCAGAAATCAAGGAGCATTTGAACTCCCTGGG 987 Query 127275 TGAAAAGCTGAAGAC 127289 || ||||||||||| Sbjct 986 AGAGAAGCTGAAGAC 972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422390966059136