Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1153676 95.1 8e-15 >seq1153676 Length=1991 Score = 95.1 bits (104), Expect = 8e-15 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| |||| ||||||||||| || || || || || ||||| Sbjct 1582 CATATCTTTGTAGTCTGCTCCAAAATGTCTCCACTGGAAACCATAAACTGGGCCCAGGTC 1641 Query 25833 TCCATCTTCCCTGTGCTCA-AAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 ||| || | | |||| | || ||| | |||||||| |||| ||| |||||||| | Sbjct 1642 TCCTTCCTGTC-GTGCAGAGAATCCCAGGCTGTCCAAAAAATCTCGGGACCCATTGGCAT 1700 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||| || | || ||||| ||| || ||||| | |||||||| || Sbjct 1701 CCCATATTCTCACTCCCTTGGAGGACAGTTCTTTAGCATTTGTGGAGCC 1749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334076455111344