Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1391428 91.5 2e-13 >seq1391428 Length=4510 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 21128 TAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTTT 21187 |||||||| ||||| || | ||| ||||||||| ||| || ||| | | | | Sbjct 2659 TAAAAATCTGCATCCAAGGTGAAGACATTATCTGTGGTTTCTGCCATGACTGCAAAGCGC 2718 Query 21188 TGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCC 21247 ||||| ||| ||||| ||| || || |||||||| || ||||| || || || |||| Sbjct 2719 TGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAACGAAATGTTTTCC 2778 Query 21248 ATAAAATCAAATGGATTTTC 21267 ||||||||||| |||||||| Sbjct 2779 ATAAAATCAAAGGGATTTTC 2798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522179461838720