Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq91636 87.8 1e-12 seq14274 84.2 2e-11 >seq91636 Length=227 Score = 87.8 bits (96), Expect = 1e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315 |||| || || || || ||| || ||| | || || |||| ||| || || |||| Sbjct 8 TCACCCTGGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCAAAGATCCAGGACA 67 Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375 ||||||| || || || || || || | || || ||||| ||||| ||| | || ||| Sbjct 68 AGGAGGGCATCCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATG 127 Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||||||| | ||||| |||||||| || || || |||||| Sbjct 128 GCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACC 168 >seq14274 Length=203 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || |||||||| ||| || ||| | || | | || Sbjct 194 ACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGACACCATCGAGAACGTGAAGGCC 135 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || || ||||| || || ||||| || || || || || ||||| ||||| Sbjct 134 AAGATCCAGGATAAAGAGGGCATCCCCCCCGACCAGCAGCGGCTCATCTTTGCGGGCAAG 75 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | || ||| |||||| | || ||||||||||| || || || |||||| Sbjct 74 CAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCCACC 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412248579254320