Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1329907 102 7e-17 >seq1329907 Length=3381 Score = 102 bits (112), Expect = 7e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| || || | ||||| ||||||||||||||| || || || ||||||||| Sbjct 619 TGTGCAATCATGTAGGTAAGGAGGGCATAGCTGGCAATGTTGAAGGGCACACCCAAACCC 560 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 || ||||| |||||||| || || || || || || || || | | ||||| |||||| Sbjct 559 ATATCTCCTGACCTCTGGTAAAGTTGGCAAGACAGTTCCCCATTTACCACATAGAATTGA 500 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || | || || || || || ||||||| Sbjct 499 CAGAGTGCATGGCAAGGAGGCAGTGCCATCA 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433510818713440