Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq825627 120 2e-22 seq1119021 82.4 6e-11 >seq825627 Length=973 Score = 120 bits (132), Expect = 2e-22 Identities = 195/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 674 TACCTGTTTGCGGCAGGGTTTCATTTCCCAGCCTCAGATATGTTTGTAACCATTGCACGC 733 |||||| || |||||| | ||||||| | ||| ||| | || | ||| | |||| Sbjct 421 TACCTGAGCGCATCAGGGTCGCCTTTCCCAACTCCAGGTATTTCTGGAGCCACTCTACGC 362 Query 734 AACTGCCCATAATATATGACCCCTGATGGATGGCTTCATCTGTCGCTTCTAATTTCCTTT 793 | |||| | ||||| || ||| ||| ||| || |||||| |||| | || | Sbjct 361 ACGGGCCCTGCAGATATGCCCTCTGGTGGTAGGCCTCGTCTGTCTTTTCTGACTTTTGCT 302 Query 794 TAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAA 853 |||| || ||||||| || ||| | || ||||||| | || || || || || || | Sbjct 301 TAGAGATCTGAGAGGCCACGTCCGTTGCCGTCCAGGAGCGCAGGTCCTCGTTTAAGGAGA 242 Query 854 TGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCC 913 | || || |||||||||||||| |||||| || || || || ||| || ||||||| Sbjct 241 TATAATCGTGGCCATCATAGGCCTCTTGACAATACCCGCGGAGCAGGCGCCCGTCCGGCC 182 Query 914 CCACAACACAGCCGGACATCCATTGGAGGGTATGTGGTTCT 954 ||| | ||||| ||||||| || || || || || ||| Sbjct 181 CCAGGTCGCAGCCATACATCCACTGCAGCGTGTGAGGCTCT 141 >seq1119021 Length=1830 Score = 82.4 bits (90), Expect = 6e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 402 ATGGCTGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACC 461 ||||||||||||||||| || |||||||| || || |||||||| ||||| || ||| Sbjct 1415 ATGGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTGTCCACTAGCTCCATG 1474 Query 462 CCATCAGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG 521 | | ||| | | |||| | | | ||||| || | | | || |||| |||||||||| Sbjct 1475 TCCTGGGTCTGGTCCTCTCCATCTTTCTGCCAGGTCAGGCTGATCTCCGAAGGATAGAAG 1534 Query 522 CCAGTGGCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGA 581 || ||||| || | || || || | | |||||| | | || |||||| || Sbjct 1535 CCCAGAGCCCAGCACCTCAGGGTGACATCTCCTTCAGGTCTGGGGTGATGGGTCACATGT 1594 Query 582 ACCTGTGG 589 ||| ||| Sbjct 1595 GCCTTTGG 1602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390659470186368