Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1357076 118 2e-21 >seq1357076 Length=3788 Score = 118 bits (130), Expect = 2e-21 Identities = 153/211 (73%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||| | ||| || || ||||||| || |||||| |||||||| Sbjct 1851 ACCAGGTGCAGGGTGGAATATTTCTGGATGTTGTAATTGGAAAGAGTGTGGCCATCTTCC 1792 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||| || || ||||| ||| | |||||| ||| | ||||||||||||| || Sbjct 1791 CGTTGCTTGCCAGCAAAGATGAGTAGCTGTTGG---GGAAGGGTGCCTTCTTTGTCCTGC 1735 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| ||||||||||||||| ||||| || ||||| | ||||| Sbjct 1734 ATCTTGACCTTGACATTCTCAATGGTGTCCCTGGGCTCCACCTCTAGGGTGATGGTCTTG 1675 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 | || | ||||| | ||| | |||| ||| Sbjct 1674 CTGGTGAGGGTTTTCATGAAGATTTGCCTTT 1644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1088697109804176