Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq649943 87.8 2e-12 >seq649943 Length=678 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| || ||||| | ||||| || || ||||| | || || || |||||||||||||| Sbjct 539 CATCACCCCCATCCTCTGATACTCGCCCACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTC 598 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 |||||| || |||||||| || ||||||||||| Sbjct 599 TAGTGAAATGTTTTCCATGAAGTCAAATGGATT 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581491262773120