Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq785234 165 1e-35 >seq785234 Length=896 Score = 165 bits (182), Expect = 1e-35 Identities = 224/310 (72%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 153702 AGTTGAAGTGGTAACACAGGATGTAAATTCATCA-CTTCGATCGCCCGCGTCCCTCAGAT 153760 ||| |||||||| || ||||||| ||| | | || | | || || ||| | ||| Sbjct 814 AGTGGAAGTGGTGACCCAGGATG-AAAGAAAGCTGCTGCACACACCTGCATCCTTACGAT 756 Query 153761 GCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAGAAGAAAGCTGTAG 153820 | || ||||| | || ||||| || ||||| || ||||| || |||||||||||| Sbjct 755 GTTCTCTGAAACAATCCCAGGAACCATTGATTGTGACATGGCAGAAAAAGAAAGCTGTAA 696 Query 153821 GTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTTCAGCCCACATATA 153880 | |||||||| |||||||| || |||||| |||| || || || | || || |||||| Sbjct 695 GCCCAGAAAACATGGCCACTTACAGCAAAACCCATGGGGTTGTAGTCCAACCTGCATATA 636 Query 153881 AAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATAACGTTTTGGAATG 153940 ||| | | || || ||||| | || || | |||| || || || || ||||| Sbjct 635 GAGACAAGGTAAACATCACCGAGCTGGGACTCTGGAACACAAGCATCACCTTCTGGAACA 576 Query 153941 CAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTCGGTTCTGGTAAGG 154000 |||||||||||||||||||||| || ||||| || || |||| || | |||||| ||| Sbjct 575 CAACACTGGATGATGAAGGCTGCTACATGTGCCTCTTCAATACATTTGTTTCTGGGAAGA 516 Query 154001 TATCGGGAAC 154010 | || ||||| Sbjct 515 TCTCAGGAAC 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 637432218241280