Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq256873 152 6e-31 seq630007 107 2e-17 >seq256873 Length=302 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||| | ||| || | || Sbjct 244 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGCACCTCTCGGGACGTGA 185 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| ||||||| || ||||||| |||| | Sbjct 184 TGGTCGAGCGCTTGTTATAATGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAAA 125 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 124 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCTTTGGAGGAGATGCCGGTGTCGGGGT 65 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 64 GCACCTGCTTCAGCACCTTGTA 43 >seq630007 Length=650 Score = 107 bits (118), Expect = 2e-17 Identities = 125/168 (74%), Gaps = 3/168 (2%) Strand=Plus/Minus Query 1254384 TGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGG---CC 1254440 |||||||| |||| ||| || |||||||| | |||||||| | | || || Sbjct 650 TGGATCTCCCGCGAAGTGATAGTAGAACGCTTGTTGTAATGCGCCAGGCTTCGGGAAGCC 591 Query 1254441 TCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG 1254500 ||| | ||||||| |||| ||||| |||||||| |||||||||| ||| | |||| Sbjct 590 TCGCCGGCGATGCGCTCGAAGATGTCATTGACAAATGAGTTCATGATGCCCATGGGCTTG 531 Query 1254501 TTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||| |||||||||||| ||||| ||||| ||||| ||| Sbjct 530 GAAGAGATGCCCGTGTCGGGGTGCACTTGCTTCAGCACTTTGTACATG 483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5987150129174576