Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq256873 158 2e-32 seq630007 91.5 2e-12 >seq256873 Length=302 Score = 158 bits (174), Expect = 2e-32 Identities = 172/227 (76%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| ||| ||| ||||| Sbjct 43 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAAGCCATG 96 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| || ||||||| ||| Sbjct 97 GGCATCATGAACTCCTTCGTCAACGACATTTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 156 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | ||||||||| || ||| | || ||| | ||||| |||||||| Sbjct 157 CTGGCGCATTATAACAAGCGCTCGACCATCACGTCCCGAGAGGTGCAGACGGCCGTGCGT 216 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| ||| || ||||||| ||| ||||| ||||||||||| Sbjct 217 CTGCTGCTGCCCGGGGAGCTGGCCAAGCATGCCGTGTCCGAGGGCAC 263 >seq630007 Length=650 Score = 91.5 bits (100), Expect = 2e-12 Identities = 125/173 (72%), Gaps = 9/173 (5%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| ||||| ||||| ||||||||| || || |||| || |||| || Sbjct 484 ATGTACAAAGTGCTGAAGCAAGTGCACCCCGACAC-----GGGCATC-TCTTCCAAGCCC 537 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGG---CC 725027 ||| ||||||||||| |||||||| ||||| |||| ||||||| | ||||| || Sbjct 538 ATGGGCATCATGAACTCATTTGTCAATGACATCTTCGAGCGCATCGCCGGCGAGGCTTCC 597 Query 725028 GGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080 | ||||||||| | ||||||||| || ||| |||| |||||||| Sbjct 598 CGAAGCCTGGCGCATTACAACAAGCGTTCTACTATCACTTCGCGGGAGATCCA 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7036786267008736