Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq14274 95.1 1e-14 >seq14274 Length=203 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 27003 AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATG 27062 || || |||||||||||| | || || || |||||||| || ||| | || |||| Sbjct 203 AAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGACACCATCGAGAAC 144 Query 27063 GTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATAC 27122 || || || || || || ||||| ||||| || ||||| || ||||| | || | Sbjct 143 GTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCCGACCAGCAGCGGCTCATCTTT 84 Query 27123 GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCG 27182 || ||||| || ||||||| | || |||| ||||||||||| || |||||||| Sbjct 83 GCGGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCC 24 Query 27183 ACCTTACATTTGGTT 27197 ||| | || ||||| Sbjct 23 ACCCTCCACCTGGTT 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427171434088304