Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq782914 104 2e-17 seq1268871 95.1 1e-14 seq1061791 89.7 5e-13 seq1042513 89.7 5e-13 seq1079191 87.8 2e-12 seq1065706 87.8 2e-12 seq796761 87.8 2e-12 seq1404137 86.0 6e-12 seq1283915 84.2 2e-11 seq1088996 84.2 2e-11 seq969177 84.2 2e-11 seq873387 84.2 2e-11 seq710744 84.2 2e-11 seq701126 84.2 2e-11 seq386718 84.2 2e-11 seq1428846 82.4 8e-11 seq1387609 82.4 8e-11 seq1329872 82.4 8e-11 seq1078817 82.4 8e-11 seq1068274 82.4 8e-11 seq993365 82.4 8e-11 seq865743 82.4 8e-11 seq793213 82.4 8e-11 seq738143 82.4 8e-11 >seq782914 Length=892 Score = 104 bits (114), Expect = 2e-17 Identities = 133/180 (74%), Gaps = 10/180 (6%) Strand=Plus/Minus Query 8426 CCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATT 8485 |||||||| |||||| |||| |||||| ||| |||||| |||||||| | | | Sbjct 472 CCTGCCTCTGCCTCCTGAGT-GCTGGGGTTAAAGGCAAGGGCCACCACTGCTGGGCCCTG 414 Query 8486 TTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG 8545 ||||| || || | |||| || || |||| ||||| || | |||| ||||||||| | Sbjct 413 TTTGT-TTGTTGTTTGAGATAGAGTCTCACTGTGTTGACCTGTCTGGCCTCGAACTCTTA 355 Query 8546 ACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCAC 8605 | |||| |||||||| |||||| ||||||||||||||||| || ||||||| Sbjct 354 GCA-------ATCCTCCTGCCTCTGCCTCC-AAAGTGCTGGGATTACATTCAGGAGCCAC 303 >seq1268871 Length=2738 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/123 (78%), Gaps = 9/123 (7%) Strand=Plus/Plus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||||| || || | |||| |||||||| | ||| ||||||||||| ||||||||| Sbjct 67 TTTTTGTGTTGTTGTTTGAGACAGGGTTTCTCTGTGTAGGCCAGGCTGGCCTCGAACTC- 125 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 || | ||||||| |||||| |||||| ||||||||||||| ||||||| ||| Sbjct 126 --AC----TAAGATCCACTTGCCTCTGCCTCC--GAGTGCTGGGATTAAAGGCATGTGCC 177 Query 8604 ACC 8606 ||| Sbjct 178 ACC 180 >seq1061791 Length=1604 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand=Plus/Plus Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTC-CTGACCTCATGTGATCCACCTGCCTCGG 8570 |||| ||| | ||||||||| || | |||| | |||| | ||||| ||||||||||| | Sbjct 26 TCACTCTGTAGACCAGGCTGGCCTTGGACTCACAGACCACCTGTGA-CCACCTGCCTCTG 84 Query 8571 CCTCCCAAAGTGCTGGGATTACAGGCATGAGCCAC 8605 ||||| | ||||||||||||| ||||||||||||| Sbjct 85 CCTCC-AGAGTGCTGGGATTAAAGGCATGAGCCAC 118 >seq1042513 Length=1536 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/94 (84%), Gaps = 6/94 (6%) Strand=Plus/Minus Query 8524 CCAGGCTGGTCTCGAACTC-CTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTG 8582 ||||||||||||||||||| | || || |||||| |||||||| ||||||||| ||| Sbjct 1515 CCAGGCTGGTCTCGAACTCACAGAGATC---TGATCCGCCTGCCTCTGCCTCCCAA-GTG 1460 Query 8583 CTGGGATTACAGGCATGAGCCACCGC-GCCTGGC 8615 |||||| || ||||||| |||||| | ||||||| Sbjct 1459 CTGGGACTAAAGGCATGGGCCACCACTGCCTGGC 1426 >seq1079191 Length=1668 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/101 (81%), Gaps = 9/101 (9%) Strand=Plus/Plus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||| | ||||||||||||||||||| || | ||||| |||||||||||||||| Sbjct 15 TGTAGACCAGGCTGGTCTCGAACTCA------CA-GAGATCCCCCTGCCTCGGCCTCCC- 66 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTGGCCC 8617 ||||||||||||| |||| || |||||| | ||||||||| Sbjct 67 AAGTGCTGGGATTGAAGGCGTGTGCCACCACTGCCTGGCCC 107 >seq1065706 Length=1618 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/106 (79%), Gaps = 10/106 (9%) Strand=Plus/Plus Query 8511 TTCACCATGTTGGCCAGGCTGGTCTCGAACTC-CTGACCTCATGTGATCCACCTGCCTCG 8569 ||||| ||| | ||||||||||||| ||||| | ||| ||||| ||||||| Sbjct 932 TTCACTCTGTAGACCAGGCTGGTCTCAAACTCACAGAC--------ATCCATCTGCCTCT 983 Query 8570 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGC 8615 ||||||||| |||||||||||| ||||||| |||||| | |||||| Sbjct 984 GCCTCCCAA-GTGCTGGGATTAGAGGCATGTGCCACCACACCTGGC 1028 >seq796761 Length=917 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/100 (82%), Gaps = 6/100 (6%) Strand=Plus/Minus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTC-CTGACCTCATGTGATCCACCTGCCTCGGCCTCCC 8576 ||| | ||||||||||||||||||| | || || ||||||||||||| ||||||| Sbjct 867 TGTAGACCAGGCTGGTCTCGAACTCACAGAGATCCA---ATCCACCTGCCTCTGCCTCCC 811 Query 8577 AAAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTGGC 8615 || ||||||||||||||||||| |||||| | ||| ||| Sbjct 810 AA-GTGCTGGGATTACAGGCATTTGCCACCACTGCCAGGC 772 >seq1404137 Length=4880 Score = 86.0 bits (94), Expect = 6e-12 Identities = 78/95 (82%), Gaps = 9/95 (9%) Strand=Plus/Plus Query 8524 CCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGC 8583 ||||||||| |||||||||| || | |||||||||||||| |||||||||| ||| Sbjct 2 CCAGGCTGGCCTCGAACTCC------CA-GAGATCCACCTGCCTCTGCCTCCCAAA-TGC 53 Query 8584 TGGGATTACAGGCATGAGCCACCG-CGCCTGGCCC 8617 |||||||| | || || ||||||| ||||||||| Sbjct 54 TGGGATTAAAAGCGTGTGCCACCGATGCCTGGCCC 88 >seq1283915 Length=2872 Score = 84.2 bits (92), Expect = 2e-11 Identities = 77/94 (82%), Gaps = 9/94 (10%) Strand=Plus/Minus Query 8524 CCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAA-AGTG 8582 ||||||||| |||||||||| || | |||| |||||||| ||||||||| |||| Sbjct 2868 CCAGGCTGGCCTCGAACTCC------CA-GAGATCTGCCTGCCTCTGCCTCCCAAGAGTG 2816 Query 8583 CTGGGATTACAGGCATGAGCCACCGC-GCCTGGC 8615 ||||||||| ||||||| |||||| | ||||||| Sbjct 2815 CTGGGATTAAAGGCATGTGCCACCACTGCCTGGC 2782 >seq1088996 Length=1706 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/132 (76%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 8501 GAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCA 8560 |||| |||||||| | ||| | | ||||| || |||||| | | || | ||||| Sbjct 1189 GAGACAGGGTTTCCCTGTGTAGCTCTGGCTGTCCTGGAACTCA--AACACA-GAGATCCT 1133 Query 8561 CCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCCTTT 8620 |||||||| |||||| | |||||||||||| |||| || |||||| ||||||| |||| Sbjct 1132 CCTGCCTCTGCCTCCTGA-GTGCTGGGATTAGAGGCCTGTGCCACCATGCCTGGCACTTT 1074 Query 8621 AAAAAGTTTTCT 8632 ||| |||||| Sbjct 1073 TAAATCTTTTCT 1062 >seq969177 Length=1312 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/133 (75%), Gaps = 11/133 (8%) Strand=Plus/Minus Query 8417 AGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCC 8476 || ||||||| |||||||||||| |||| |||||||||| ||||| ||||||||| | Sbjct 1016 AGTTATTCTC-TGCCTCAGCCTCATGAGT-GCTGGGATTAAAGGCATGAGCCACCACTGC 959 Query 8477 AAGCTAATTTTTGT---ATTT------TTAGTAGAGAGAGGGTTTCACCATGTTGGCCAG 8527 |||| ||||||| |||| | | |||||||||| ||| | ||| | ||| Sbjct 958 CAGCTGTTTTTTGTTTGATTTGTTTTATAAAGAGAGAGAGGGACTCATCTTGTAGCCCAA 899 Query 8528 GCTGGTCTCGAAC 8540 ||||||||| ||| Sbjct 898 GCTGGTCTCAAAC 886 >seq873387 Length=1074 Score = 84.2 bits (92), Expect = 2e-11 Identities = 80/99 (81%), Gaps = 9/99 (9%) Strand=Plus/Minus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||| | ||||||||| ||||||||| || | |||||||||||||| | ||||| Sbjct 1072 TGTAGACCAGGCTGGCCTCGAACTCA------CA-GAGATCCACCTGCCTCTGGTTCCCA 1020 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTGGC 8615 | |||||||||||| |||||||||||||| | ||||||| Sbjct 1019 A-GTGCTGGGATTAAAGGCATGAGCCACCACTGCCTGGC 982 >seq710744 Length=769 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/195 (71%), Gaps = 23/195 (12%) Strand=Plus/Minus Query 8426 CCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAG----GCAAAAGCCACCAC-GCCAAGC 8480 |||||||| |||||| |||| |||||||||| || ||| |||||||| ||| || Sbjct 762 CCTGCCTCTGCCTCCTGAGT-GCTGGGATTAAAGATGTGCACC-GCCACCACTGCCTGGC 705 Query 8481 TA-ATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAA 8539 | | || || ||||| |||| || || |||| ||| | ||| | ||| ||| Sbjct 704 TTTAGGTTGGTTTTTTT----GAGACAGAGTCTCACTGTGTAGCCCATGTTGGCCTCAGG 649 Query 8540 CTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATG 8599 |||| ||| | |||||||| ||||||||| |||||||||||| ||| || Sbjct 648 CTCCCTACC----------CTCCTGCCTCAGCCTCCCAA-GTGCTGGGATTATAGGTGTG 600 Query 8600 AGCCACCGCGCCTGG 8614 |||||||| |||||| Sbjct 599 AGCCACCGTGCCTGG 585 >seq701126 Length=753 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 8542 CCTGACCTCA-TGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGA 8600 ||||| |||| || |||||||||||||| ||||||| | |||||||||||||||| || Sbjct 748 CCTGAACTCACTGAGATCCACCTGCCTCTGCCTCCCGA-GTGCTGGGATTACAGGTGTGC 690 Query 8601 GCCACCGCGCCTGGC 8615 |||||| |||||||| Sbjct 689 GCCACCACGCCTGGC 675 >seq386718 Length=391 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAT-GTGATCCACCTGCCTCGGCCTCCC 8576 ||| |||||||||| ||||||||| ||| |||| | | |||||||||| | ||||||| Sbjct 283 TGTAGGCCAGGCTGACCTCGAACTCATGAACTCACAGAGTTCCACCTGCCCCTGCCTCCC 224 Query 8577 AAAGTGCTGGGATTACAGGCATGAGCCACC 8606 || ||||||||||| ||||||| || ||| Sbjct 223 AA-GTGCTGGGATTTAAGGCATGTGCTACC 195 >seq1428846 Length=5965 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/98 (82%), Gaps = 4/98 (4%) Strand=Plus/Plus Query 8524 CCAGGCTGGTCTCGAACTC-CTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTG 8582 ||||||||| ||||||| | | |||| || | |||| ||||||| |||||| |||||| Sbjct 805 CCAGGCTGGCCTCGAACCCACAGACCACA-GAGATCTGCCTGCCTTTGCCTCC-AAAGTG 862 Query 8583 CTGGGATTACAGGCATGAGCCACC-GCGCCTGGCCCTT 8619 ||||||||| ||||||| ||||| || ||||||||| Sbjct 863 CTGGGATTAAAGGCATGCACCACCAACGTCTGGCCCTT 900 >seq1387609 Length=4415 Score = 82.4 bits (90), Expect = 8e-11 Identities = 76/93 (82%), Gaps = 9/93 (10%) Strand=Plus/Plus Query 8524 CCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGC 8583 ||||||||||||||||||| || | ||||| |||||||| ||||||||| |||| Sbjct 1545 CCAGGCTGGTCTCGAACTCA------CA-GAGATCCGCCTGCCTCCGCCTCCCAA-GTGC 1596 Query 8584 TGGGATTACAGGCATGAGCCACC-GCGCCTGGC 8615 |||||||| ||||||| |||||| ||||||| Sbjct 1597 TGGGATTAAAGGCATGTGCCACCAATGCCTGGC 1629 >seq1329872 Length=3381 Score = 82.4 bits (90), Expect = 8e-11 Identities = 82/103 (80%), Gaps = 9/103 (9%) Strand=Plus/Minus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||| | ||||||||||||||||||| || | |||||||||||||| || ||||| Sbjct 3350 TGTAGACCAGGCTGGTCTCGAACTCA------CAGG-GATCCACCTGCCTCTGCATCCCA 3298 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTGGCCCTT 8619 | |||||||||||| ||||| | |||||| | ||| ||| ||| Sbjct 3297 A-GTGCTGGGATTAAAGGCAAGTGCCACCACTGCCAGGCTCTT 3256 >seq1078817 Length=1667 Score = 82.4 bits (90), Expect = 8e-11 Identities = 72/89 (81%), Gaps = 7/89 (8%) Strand=Plus/Minus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||| | |||||||||||||||||| || || |||||||| |||| |||||||| Sbjct 1614 TGTAGACCAGGCTGGTCTCGAACTT---AC----TGAGATCCACCAACCTCTGCCTCCCA 1562 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACC 8606 |||||||||||| | ||||||| |||||| Sbjct 1561 AAGTGCTGGGATCAAAGGCATGTGCCACC 1533 >seq1068274 Length=1628 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/194 (71%), Gaps = 22/194 (11%) Strand=Plus/Plus Query 8427 CTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC-ACCACGCCAAGCTAATT 8485 |||||||||||||| | | ||||||||| |||| ||| ||| | ||| ||| Sbjct 721 CTGCCTCAGCCTCCTGTG---CTGGGATTAAAGGCGTGTGCCCACCCAGTTAAGATAAAC 777 Query 8486 TTTGTATTTTTAGTAGAGAGAGGGTTTCACC---ATGTTGGCCAGGCTGGTCTCGAACTC 8542 ||| ||||||| | ||| ||||| || | |||| | ||||||||| || || || Sbjct 778 TTT-TATTTTTTG---AGACAGGGTCTCTCATTGATGTAGCCCAGGCTGGGCTTGATGTC 833 Query 8543 CTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGC 8602 |||| | | |||||||| | |||| | |||||||||||||||| ||||| Sbjct 834 CTGAAC----------CTCCTGCCTCAGTCTCCTGA-GTGCTGGGATTACAGGTGTGAGC 882 Query 8603 CACCGCGCCTGGCC 8616 |||| |||||||| Sbjct 883 CACCAGGCCTGGCC 896 >seq993365 Length=1381 Score = 82.4 bits (90), Expect = 8e-11 Identities = 124/172 (72%), Gaps = 16/172 (9%) Strand=Plus/Minus Query 8435 GCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTT 8494 |||||||||||| ||| ||||| ||| | |||| | ||| ||||| || || ||||| Sbjct 1180 GCCTCCAGAGTA-CTGAGATTAAAGGTATGTGCCAAGATGCCCAGCTACTTATT-TATTT 1123 Query 8495 TTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGT 8554 ||||||| ||||||| |||| | || |||||| || |||||| || | Sbjct 1122 ------GAGAGAGTGTTTCACAATGTCGCCCTGGCTGGCCTTGAACTCA------CA-GA 1076 Query 8555 GATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACC 8606 ||||| ||||||| ||| || | |||||||||||| ||| || ||||| Sbjct 1075 AATCCAACTGCCTCTGCCAGCCTA-GTGCTGGGATTAAAGGTGTGTACCACC 1025 >seq865743 Length=1057 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/96 (80%), Gaps = 8/96 (8%) Strand=Plus/Plus Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGT-GATCCACCTGCCTCGG 8570 |||| |||| | ||||||||| ||| ||||| ||| | ||||||||||| | || Sbjct 942 TCACTATGTAGACCAGGCTGGCCTCAAACTC------TCAGGGAGATCCACCTGCTTTGG 995 Query 8571 CCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACC 8606 |||||||| |||||||||||| |||| ||||||||| Sbjct 996 CCTCCCAA-GTGCTGGGATTAAAGGCGTGAGCCACC 1030 >seq793213 Length=911 Score = 82.4 bits (90), Expect = 8e-11 Identities = 94/124 (76%), Gaps = 12/124 (10%) Strand=Plus/Plus Query 8511 TTCACCATGTTGGCCAGGCTGGTCTCGAACTC-CTGACCTCATGTGATCCACCTGCCTCG 8569 ||||| |||| | ||||||||| ||||||||| | ||| ||||||||||||| Sbjct 47 TTCACTATGTAGACCAGGCTGGCCTCGAACTCACGGAC--------ATCCACCTGCCTCT 98 Query 8570 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCCTTTAAAAAGTTT 8629 || |||| |||| ||||||||| | |||||||| || | ||||| || || | |||| Sbjct 99 GCTTCCC-AAGTACTGGGATTAAATGCATGAGCTACTACACCTGG--CTGTACTATGTTT 155 Query 8630 TCTT 8633 |||| Sbjct 156 TCTT 159 >seq738143 Length=813 Score = 82.4 bits (90), Expect = 8e-11 Identities = 79/100 (79%), Gaps = 10/100 (10%) Strand=Plus/Plus Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||| | |||||||||||||||||||| || |||||||||||||| |||| || Sbjct 34 TGTAGACCAGGCTGGTCTCGAACTCCAGA--------GATCCACCTGCCTCTGCCT-CCT 84 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGC-GCCTGGCC 8616 ||||||||||||| || ||| |||||| | |||||||| Sbjct 85 GAGTGCTGGGATTAAAGATATGGGCCACCACTGCCTGGCC 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511956972419200