Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value SEQ28171 87.8 1e-12 >SEQ28171 Length=118966 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394 || ||||| || || | ||||||||||| || || ||||||||| | |||||| | Sbjct 106622 ATCAAAACCAATCCTGATGACAGAAGAATCATCACGTGTGCCTGGAACCCAAAAGATCTT 106681 Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAA 20454 || | ||||| ||||||| || ||| || || | || || || | ||| || Sbjct 106682 CCCCTGATGGCACTGCCTCCTTGCCATGCCCTCTGTGAGTTCTATGTGGTGAATGGAGAG 106741 Query 20455 TTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATT 20514 |||| || || | || || | || | |||||||| |||||||| || || || ||| Sbjct 106742 CTGTCTTGCCAGCTTTACCAGAGGTCAGGAGATATGGGTCTGGGTGTGCCCTTTAACATT 106801 Query 20515 GCAAGTTATGCGCTGCTTACGTATATGATTG 20545 || || ||||| |||| || || |||| || Sbjct 106802 GCCAGCTATGCCCTGCACACCTACATGAGTG 106832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398714877341515