Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value SEQ23565 100 2e-16 >SEQ23565 Length=11847 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || ||||||||||| || ||||| || ||| | || ||||| | || Sbjct 9959 ATGCAGATCTTCGTGAAAACCTTAACTGGTAAAACCATCACCCTAGAGGTCGAGCCCAGT 9900 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||| |||| ||| || | || |||||| | || ||||||| Sbjct 9899 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 9840 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | | || | ||||||||| || ||||||||| | || || ||| |||| | Sbjct 9839 CAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 9780 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || ||||||||| |||| || || Sbjct 9779 ATCCAGAAAGAGTCCACTCTGCA 9757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417812407439840