Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value SEQ77412 84.2 7e-12 >SEQ77412 Length=249 Score = 84.2 bits (92), Expect = 7e-12 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 44385 CCCGAGGCGCTCGTCGAACCTTGCGTGCTCGCCGGCAGTCGGCCGGGCGACGTCGTGTTC 44444 ||||||||||| || | | | |||||||| ||| |||||||||||| ||| || Sbjct 21 CCCGAGGCGCTGCTCTACCGGATCATGCTCGCCAGCACCAAGCCGGGCGACGTGGTGCTC 80 Query 44445 GATCCGTTCTTCGGCAGCGGCACGACCGGACAAGTAGCGCAGCGCCTCGGCCGCCGTTTC 44504 ||||| || ||||||| |||||| ||||| || || |||| |||||||| || | Sbjct 81 GATCCCTTTTTCGGCACCGGCACCACCGGCGCGGTCGCCAAGCGGCTCGGCCGGCGCTGG 140 Query 44505 ATCGGC 44510 |||||| Sbjct 141 ATCGGC 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170476568506290