Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value SEQ35906 87.8 2e-12 >SEQ35906 Length=62346 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 || ||||| | |||||| ||| |||||||||||||||||| |||| ||| || | Sbjct 33463 CTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGCACGGCCA 33404 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||||||||| || | | || | | |||| |||| || | | |||||| Sbjct 33403 TCTTCCAGCTGCTTCCCAGCAAAGATCAGTCTCTGCCGATCAGGAGGAATTCCTTCCTTA 33344 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| || || ||| | | |||| || || | | || ||||| ||| ||| Sbjct 33343 TCCTGGATCTTGGCCTTTACATTTTCTATTGTGTCCGAGGGTTCAACCTCGAGTGTGATG 33284 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || || || || || || |||||||||||||||||| Sbjct 33283 GTCTTCCCCGTAAGGGTCTTCACAAAAATCTGCATC 33248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420756143878427