Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value SEQ28171 116 3e-21 >SEQ28171 Length=118966 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 20270 AGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATAC 20329 |||| |||||||||||||||||| || || |||| |||||| ||||| |||||||| || Sbjct 106815 AGGGCATAGCTGGCAATGTTAAAGGGCACACCCAGACCCATATCTCCTGACCTCTGGTAA 106756 Query 20330 AGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGA 20389 ||||| || || ||||| || | | ||||| || | ||| | || || || || Sbjct 106755 AGCTGGCAAGACAGCTCTCCATTCACCACATAGAACTCACAGAGGGCATGGCAAGGAGGC 106696 Query 20390 AGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGC 20449 || ||||||| | | || |||||||| |||||| | ||||||||||| || | Sbjct 106695 AGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACGTGATGATTCTTCTGTCATCA 106636 Query 20450 GGATTATTTTTTAT 20463 ||||| |||| || Sbjct 106635 GGATTGGTTTTGAT 106622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440840796812680