Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value SEQ39802 302 3e-76 seq646 141 7e-28 SEQ32057 113 3e-19 SEQ81609 105 5e-17 SEQ50146 104 2e-16 SEQ15041 104 2e-16 SEQ58005 95.1 9e-14 seq3297 89.7 4e-12 >SEQ39802 Length=148537 Score = 302 bits (334), Expect = 3e-76 Identities = 955/1464 (65%), Gaps = 26/1464 (2%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| || || || || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 1940 GCAGAAACCTTGAGGATGCCATTGGCATCAGTGTCAAAGGTGACTTCAATCTGAGGGACA 1881 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | | || || | || ||| | | ||| |||| || || ||||| ||| Sbjct 1880 CCACGAGGTGCTGGAAGTATGCCTGTGAGTTCAAACTTTCCAAGCAGGTTGTTATCCTTA 1821 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | || ||| || | | || || || ||| || || || || || Sbjct 1820 GTCATGGCCCTTTTACCTTCATACACCTGAATGAGCACACCAGGCTGGTTGTCAGAGTAG 1761 Query 517439 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || || || | |||| | | || |||||| || || || | | || | || Sbjct 1760 GTGGTGAA-AGTCTGAGTCTGCTTGGTAGGAATGGTGGTATTGCACTTGATGAGGACAGT 1702 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | ||||| || ||||| | |||||| ||||||||||||||||| | || | | Sbjct 1701 CATGACTCCACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAACAGCAACAA 1642 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 || |||| || ||| | | || | ||| ||||| || | ||| |||||||| Sbjct 1641 ATCCTGAACGTTCTCAGACTTGTCTCCTGATAAAATGGCTGCCTGGACAGCTGCACCATA 1582 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 517677 ||||||||||||||||| |||| | | || |||| ||| || ||||| || | | Sbjct 1581 AGCAACAGCTTCATCAGGGTTAATGCTCTTGTTCAGTTCTTTCCCGTTGAAGAAGTCTTG 1522 Query 517678 AAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 517736 ||||| | ||| | ||| || || | || || || ||||| | ||||| ||||| | Sbjct 1521 CAGAAGCT-TCTGAATCTTGGGGATTCCAGTAGAACCACCAACCAGCACAATGTCATGAA 1463 Query 517737 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 |||||| || || ||||| | ||| | | ||||| || || || || | | Sbjct 1462 TCTGTGACTTGTCAAGTTTGGCATCTCGAAGGGCCTTTTCTACAGGATCCAGTGTGCCAC 1403 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 517856 |||| || | | | ||| || ||| ||| | |||| || | || | |||| Sbjct 1402 GGAACAGCTCAGCATTCAATTCCTCAAATCAAGCACGGGTAATAGAGGTATAGAAGTCAA 1343 Query 517857 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC--GAAGAAGATAGTGCACG 517914 ||| || | | |||||||| ||||| | | || || | || ||| |||||| Sbjct 1342 ATCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGTGCAC- 1284 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGATTGATTCA 517970 ||||| |||||||| || || | || | | ||| | | || | |||| Sbjct 1283 -TTAGCCCGTTCACAGGCAGTACGGAGATGCCTGACAGCTCTCTTGTTCTCACTGATG-- 1227 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 518028 || | || | |||| || || || ||| || ||| | || | || ||||| Sbjct 1226 --TCCTTCTTGTGCTTTCATTTAAACTCAGCAATGCA--ATGGTTGACCATTCGGTTATC 1171 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 ||| ||||| || ||||| | || | ||| | || | | | |||| |||| ||||| Sbjct 1170 AAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTGGATTTCACTTCAAAAATGCCATC 1111 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 |||| | | | | ||||| || ||||| | || |||||||| || ||||| Sbjct 1110 CTCAATTGTGAGGATTGACACATCCAAAGTACCACCTCACAAGTCAAAAATCAGCACATT 1051 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 | |||| | || ||||| | |||||| |||| ||||||||||||||||||||| Sbjct 1050 CCTTTCAGCTCCAACCTTCTTATCTAAACCATAAGCAATAGCAGCAGCAGTTGGTTCATT 991 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 ||||||| | |||||||| |||||||| |||| |||||||| || || |||| || Sbjct 990 GATAATTCGAAGTACATTAAGGCCAGCAATAGTTCCAGCATCTTTTGTTGCCTGTCGCTG 931 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATA 518328 || || || || || || || || || | || |||| || || || |||| || Sbjct 930 AGAGTCATTGAAGTAAGCTGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCAAGGTA 871 Query 518329 AGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA-AT 518387 || ||| ||| ||||| ||| | | || ||| || || | || |||||| | | Sbjct 870 GGCTTCTGCAATTTCCTTCATCTTAGTGAGAACCATAGAGGACACTTCCTCTGGGTAGAA 811 Query 518388 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 518447 | | ||| | |||| ||| ||||| | | || | || |||| | | Sbjct 810 ACTTTTTGTCTCTCCTTTG-TATTCTACTTGGACCTTGGGCCTGCCTGCATCATTCACCA 752 Query 518448 CTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT-ACCA 518506 | | || ||||||| |||||||| ||||||||| ||| | ||| || | | Sbjct 751 CCATGAAGGGCCAGTGCTTCATATCAGATTGAACAACAGCATCA-TCAAACCTATGTTCG 693 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || | ||||| |||||||||| || ||||| || || |||||| | || | ||| || Sbjct 692 ATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGGTTTTTCGCA 633 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 ||||| ||||| ||| ||||||| || ||||| | |||||| ||||| || | ||| Sbjct 632 GCATCCCCAATTAGACGTTCTGTGTCCGTAAAAGCAACATAGCTCGGAGTGGTTCAGTTA 573 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG--CCATACACCTACACAACTAA 518684 || || ||||| ||||| ||||| || || |||| || | ||||| ||||| Sbjct 572 CCCTGGTCATTGGCAATTATTTCCACCTTTCCATGCTGGAAGACACACCCACACAGGAGT 513 Query 518685 AAGTTGTTCCTAAATCAATACCAA 518708 | || || || | |||||| |||| Sbjct 512 AGGTGGTGCCAAGATCAATGCCAA 489 >seq646 Length=52088 Score = 141 bits (156), Expect = 7e-28 Identities = 765/1212 (63%), Gaps = 33/1212 (3%) Strand=Plus/Minus Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 ||||| || ||||| | |||| | ||||||||||||||||| | || | | || ||| Sbjct 22264 CCACCAGCAGTTTCAACACCAGG-GAAAGAGGAGTGACATCTAACAGCAACAAATCCTGA 22206 Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | || ||| | | || | ||| ||||| | | ||| |||||||| |||||| Sbjct 22205 ACGTTCTCAGACTTGTCTCCTGATAAAATGGCTGCCGGGACAGCTGCACCATAAGCAACA 22146 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684 |||||||| || |||| | | ||| |||| || || ||||| || | | ||||| Sbjct 22145 GCTTCATCGGGGTTAATGTTCTTATTCAGTTCCTTTCCGTTGAAGAAGTCTTGCAGAAGC 22086 Query 517685 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| | ||| || || | || || || ||||| | ||||| ||||| | |||||| Sbjct 22085 T-TCTGAATCTTGGGGATTCTAGTAGAACCACCAACCAGAACAATGTCATGAATCTGTGA 22027 Query 517744 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAA 517803 || || ||||| | ||| | | ||||| | || || || | |||| Sbjct 22026 CTTGTCAAGTTTGGCATCTCGAAGGGCCTTTTCTATAGGATCCAGTGTGCCATGGAACAG 21967 Query 517804 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTC 517863 || | | | ||| || ||| ||| |||| || | || | ||| |||| || Sbjct 21966 CTCAGCATTGAATTCCTCAAATCGAGCATGGGTAACAGAGGTATAGAAGTCAGTTCCCTC 21907 Query 517864 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 517923 | | |||||||| ||| | | | || || || || || || ||||| | Sbjct 21906 ACAGAGAGAATCAATCTCAGTACTGGCCTGGGTGCTGGAGGAGAGGCTGCGCTTAGCCCA 21847 Query 517924 TTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATTGATTCAAATCTGTTT 517979 |||||| || || || | | | || ||| | || | |||| || | | Sbjct 21846 TTCACAGGCAGTATGGAGACACCTGACAGCTCTCTTGTTCTCACTGAT----GTCCTTCT 21791 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTC 518037 | | |||| || || || ||| | ||| | || | || |||||||| ||||| Sbjct 21790 TGTGCTTTCGTTTAAACTCAGCAATGAA--ATGGTTGACCATTCGGTTATCAAAGTCTTC 21733 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 518097 || ||| | | || | || | || | | | || | |||| |||||| |||| | Sbjct 21732 TCCACCCTAGTGGGTGTCTCTAGCTGTTGATTTCACCTCAAAAATTCCATCCTCAATTGT 21673 Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 | | | ||||| || ||||| || | | ||||| || |||||| |||| Sbjct 21672 GAGGATTGACACATCGAAAGTACCACCGCCAAAGTAGAAAATCAGCACATTCCTTTCAGC 21613 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 | || | ||| |||||||| |||| ||||| |||| |||||| || |||||| Sbjct 21612 TCCAACCTTCTGATCCAGACCATAAGCAATCGCAGCGGCAGCTGGTTCGTTGGTAATTCG 21553 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 | | | || |||||| | |||| |||||||| || || |||| || || || || Sbjct 21552 AAGTCTACTGAGGCCAGCAGTAGTTCCAGCATCTTTTGTTGCCTGTCGCTGAGAGTCATT 21493 Query 518278 AAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGC 518337 || || || || || || | || |||| || || || |||| || || ||| Sbjct 21492 GAAGTAAGCTGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCAAGGTAGGCTTCTGC 21433 Query 518338 CGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA-ATATTGCTTGG 518396 ||| ||||| ||| | | || ||| || || | || |||||| | | | | ||| Sbjct 21432 AATTTCCTTCATCTTAGTGAGAACCATAGAGGACACTTCCTCTGGGTAGAAACTTTTTGT 21373 Query 518397 ATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATG 518456 | |||| ||| ||||| | | || | || |||| | Sbjct 21372 CTCTCCTTTG-TATTCTACTTGGACCTTGGGCCTGCCTGCATCATTCA------------ 21326 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATTAATCGT 518515 |||| |||||||| || |||||| ||| | |||||| | || || | || Sbjct 21325 --CAGTGCTTCATATCAGACTGAACAACAGCATCA-TCAAATCTACGTCCGATCAGAAGT 21269 Query 518516 TTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCA 518575 || |||||||||| || ||||| || || |||||| | |||| ||| | ||||| ||| Sbjct 21268 TTGGCATCAAAAACTGTCTTGGTGGGGTTCATTGCAACCTGATTTTTCACAGCATCCCCA 21209 Query 518576 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 518635 | || ||||||| |||||||| | |||||| |||| || || ||||| | ||| Sbjct 21208 GTTAGTCGTTCTGTGTCTGTAAAAGCAACATAGCTCAGAGTGGTTCGGTTACCCCGGTCA 21149 Query 518636 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCT 518695 || ||||| ||||| | || |||| || | ||||| ||||| | || || || Sbjct 21148 TTGGCAATTATTTCCATCTTTCCATGCTGGAAGACACCCACACAGGAGTAGGTGGTGCCA 21089 Query 518696 AAATCAATACCA 518707 | |||||| ||| Sbjct 21088 AGATCAATGCCA 21077 >SEQ32057 Length=68597 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || ||||| | |||||| |||| ||||||||||||||||||||| ||||||| | ||| Sbjct 2041 TTCTTATCTAAACCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCGAAGTACA 1982 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 ||||| |||||||| |||| |||||||| || || |||| || || || || || || Sbjct 1981 TTAAGGCCAGCAATAGTTCCAGCATCTTTTGTTGCCTGTCGCTGAGAGTCATTGAAGTAA 1922 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || || || | || |||| Sbjct 1921 GCTGGCACTGTGACCACAGCAT 1900 Score = 89.7 bits (98), Expect = 4e-12 Identities = 355/552 (64%), Gaps = 14/552 (3%) Strand=Plus/Minus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| ||||||||||||||||| |||| | | || |||| ||| || ||||| Sbjct 2687 GCACCATAAGCAACAGCTTCATCAGGGTTAATGCTCTTGTTCAGTTCTTTCCCGTTGAAG 2628 Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 || | | ||||| | ||| | ||| || || | || || || ||||| | ||||| Sbjct 2627 AAGTCTTGCAGAAGCT-TCTGAATCTTGGGGATTCTAGTAGAACCACCAACCAGAACAAT 2569 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | |||||| || || ||||| | ||| | | ||||| || || || || Sbjct 2568 GTCATGAATCTGTGACTTGTCAAGTTTGGCATCTCGAAGGGCCTTTTCTACAGGATCCAG 2509 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 | | |||| ||| | | | ||| || ||| ||| | |||| || | || Sbjct 2508 TGTGCCACGGAACAGGTCAGCATTCAATTCCTCAAATCGAGCACGGGTAATAGAGGTATA 2449 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 | |||||||| || | | |||||||| ||||| | | || || || || || Sbjct 2448 GAAGTCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAG 2389 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATT 517964 | || ||||| |||||||| || || | || | | | || ||| | || | | Sbjct 2388 GGTGCGCTTAGCCCGTTCACAGGCAGTACGAAGACGCCTGACAGCTCTCTTGTTCTCACT 2329 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022 ||| || | || | |||| || || || ||| | ||| | || | || Sbjct 2328 GAT----GTCCTTCTTGTGCTTTCGTTTAAACTCAGCAATGAA--ATGGTTGACCATTCG 2275 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 |||||||| ||||| || ||||| | || | ||| | || | | | |||| |||| Sbjct 2274 GTTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTGGATTTCACTTCAAAAAT 2215 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 ||||| |||| | | | | |||||| || ||||| |||| |||||||| || Sbjct 2214 GCCATCCTCAATTGTGAGGATTGACACATCAAAAGTACCACCTCCCAAGTCAAAAATCAG 2155 Query 518143 TACATTCATTTC 518154 || ||| |||| Sbjct 2154 CACGTTCCTTTC 2143 >SEQ81609 Length=287 Score = 105 bits (116), Expect = 5e-17 Identities = 184/266 (69%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 397439 TCATCTTTAACAAATGTAGTCAACATTAGTGAATACATTTCTCCATGAGCATTTTCCATT 397498 || ||||| ||| | ||| | || || |||||| |||| | |||| ||||||||| Sbjct 274 TCGTCTTTTACATAAGTATCTATCAAAAGCGAATACGTTTCACTATGAATATTTTCCAT- 216 Query 397499 GCATA--TTGGAAACCATAAGCACATTCAGCTTCTTTTATTTTCACAACATCAATAAGAT 397556 ||| |||||||||||| | ||| |||||| || ||| ||| || || || Sbjct 215 -CATGATTTGGAAACCATAGAAAAATTTAGCTTCGGCATATTGCACTTCATTAACAAAAT 157 Query 397557 TTTCTTTAATATTAGCATTAACAATACCATCAGCTGCCGCAAAAAATGCCAATACGTGCA 397616 | || || ||| ||||||| || || || | || || ||||| || | | || Sbjct 156 TCTCAGCAAGATTTTCATTAACGATTCCGTCTGAAGCTGCGAAAAAGGCAAGAATATGTT 97 Query 397617 TAATAAAATTTCTATCATCATCGCTCAAATGATTATTCCAATCATTCACATCTTTTGCCA 397676 | ||||| | | |||||||| | || | ||||||||| ||||| | ||||| || || Sbjct 96 TTATAAAGTAACGCTCATCATCATTTAACTTATTATTCCAGTCATTTAAATCTTGTGACA 37 Query 397677 AATCCACTTCTTCAACTGTCCAATAA 397702 | || | ||||||| |||||||| || Sbjct 36 AGTCAATTTCTTCAGCTGTCCAAAAA 11 >SEQ50146 Length=14376 Score = 104 bits (114), Expect = 2e-16 Identities = 271/410 (66%), Gaps = 4/410 (1%) Strand=Plus/Minus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 ||||| || || ||||||||||| | ||||| ||||||||||| |||||||| || | Sbjct 4367 ACATTGAGGATGCCATTGGCATCAATGTCAAAAGTGACTTCAATCTGAGGGACACCACGA 4308 Query 517325 TGAGCAGGTGGGATC--CCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGA 517382 | || || || || ||| | | ||| |||| || || ||||| || || | Sbjct 4307 GGTGCTGGAGGTATATGCCTGTGAGTTAAAACTTTCCAAGCAGGTTGTTATCCTTGGTCA 4248 Query 517383 ATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTG 517442 | |||||| || | | || || || ||| || || || || || || | Sbjct 4247 TGGCCCTTTCACCTTCATACACCTGAATGAGCACACCAGGCTGGTTGTCAGAGTAGGTGG 4188 Query 517443 TAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 517501 |||| | |||| | | || |||||| || || || | | || | ||||| Sbjct 4187 TAAA-AGTCTGAGTCTGCTTGGTAGGAATGGTGGTATTGCGCTTGATGAGGACAGTCATG 4129 Query 517502 ATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 517561 | ||||| || ||||| | |||||| ||||||||||||||||| | || | | || Sbjct 4128 ACTCCACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAACAGCAACAAATCC 4069 Query 517562 TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 517621 |||| || ||| | | || | ||| ||||| || | ||| ||| |||| ||| Sbjct 4068 TGAATGTTCTCAGACTTGTCTCCTGATAAAATGGCTGCCTGGACAGCTGCAACATAAGCA 4009 Query 517622 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671 |||||||||||||| |||| | | || |||| ||| || ||||| || Sbjct 4008 ACAGCTTCATCAGGGTTAATGCTCTTGTTCAGTTCTTTCCCGTTGAAGAA 3959 >SEQ15041 Length=190731 Score = 104 bits (114), Expect = 2e-16 Identities = 217/318 (68%), Gaps = 18/318 (6%) Strand=Plus/Plus Query 517087 GTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCT 517144 || || ||| |||| |||||||| | | |||| || ||| ||| ||| || ||| Sbjct 23734 GTAAGCATAGCTTTCCAATTCATTCCTGGTGTCAAT-GC-GCTCTTTGAGCTTTTTGTCT 23791 Query 517145 GCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGAGAA 517200 | || | || | | ||| || ||| ||| |||||||||| || ||||| | Sbjct 23792 TCCTCAGCGAACTTCTCAGCATCATTAACCATCCTCTCAATTTCTTCAGGTGTCAGACGA 23851 Query 517201 TCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGA---TTTATCAGC 517257 | || | | ||| ||||| || || || || ||| ||| || ||| || | Sbjct 23852 TTTT----GGTCATTGGTAATTGTGATTTTGTT---TTTATTTCCTGTACCTTTGTCTTC 23904 Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 || ||||| |||||||||||| |||| | ||||| |||||||||||||| || || Sbjct 23905 AGCTGTCACTCGAAGAATACCATTAACATCTATCTCAAAAGTGACTTCAATTTGGGGTAC 23964 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||| | ||||||| |||||||| || || |||||| |||||| || ||| ||||| Sbjct 23965 CCCACGAGGAGCAGGAGGGATCCCAGTCAGATCAAATGTACCCAGAAGATGATTGTCTTT 24024 Query 517378 AGTGAATTTTCGTTCACC 517395 || | ||||||||| Sbjct 24025 TGTTAGGGGTCGTTCACC 24042 >SEQ58005 Length=65375 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 635439 AATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTA 635498 ||||||| || || ||||| |||||||| ||||| ||||| | || | || |||||| Sbjct 13041 AATGTACGCTTATCTTGACTGAGGGAGACTCAGCCAAAACTCTGGCAGTTTCAGGTCTTG 13100 Query 635499 ATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTA 635558 ||| |||||||||| | ||||| || ||||| |||||||||||| | | ||||| Sbjct 13101 GTGTGGTTGGAAGAGACAAATATGGGGTATTCCCTCTTAGAGGAAAAATACTCAATGTGC 13160 Query 635559 GGGATGCTAGTCCTAAA 635575 | || ||| || |||| Sbjct 13161 GAGAAGCTTCTCATAAA 13177 >seq3297 Length=104533 Score = 89.7 bits (98), Expect = 4e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| || || || ||||| ||||| ||||| ||||||||| | || || | ||||| Sbjct 57919 TGTTGTGGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTTAT 57978 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||||||||| ||||| ||| | || || ||||| || ||||| || ||||| || || Sbjct 57979 TCATTATGGCGCTCCTAAGGAAATGGAGTCCTATTACCAGGAAATCGGCAGAGCTGGCCG 58038 Query 367113 TGATGGA 367119 ||||||| Sbjct 58039 TGATGGA 58045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3776037374629462