Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value SEQ81069 84.2 3e-11 >SEQ81069 Length=281 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/169 (73%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 54539 AGATCGAGTTCGCCTCGTTCGAGCACATGCGCGGCCGGACCTTCGCCGAGTGCTG-CGTC 54597 |||||||| |||| || ||| |||||||||||| ||| | | | | ||| | | || Sbjct 101 AGATCGAGATCGCGCCGCTCGCCTTCATGCGCGGCCGCACCCT-GACCAATGCCGCCATC 159 Query 54598 CTCCTCGACGAGGCGCAGAACGCCGACTACAAGGACCTGAAGATGGTCCTGACCCGCTGG 54657 |||||||||||||||||||| || || | | | |||||||| ||||||| || Sbjct 160 ATCCTCGACGAGGCGCAGAACACCACCTCGATGCAGATGAAGATGTTCCTGACGCGTCTC 219 Query 54658 GGCGAGAAC-GCCCAATACGCGGTCACCGGCGACATCGACCAGATCGAC 54705 || |||||| ||| || | |||||||||||| | ||||||||| Sbjct 220 GGTGAGAACAGCCGGATGATC-GTCACCGGCGACCCCTCGCAGATCGAC 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708866145940960