Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value SEQ13259 84.2 3e-11 >SEQ13259 Length=38172 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 76192 GTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT 76251 ||| |||| || ||| | || ||||| | || || |||||||| || |||| || || Sbjct 18154 GTCAAATAAACGCCACCGGCCCATTGGAATTGGGGTACAAGGTCTAGCAGATGCTTTCAT 18213 Query 76252 TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGA 76311 ||| | ||| | ||||| |||||| || | ||||| | |||||||| Sbjct 18214 CTTGATGAGGTACCCCTTTGAGAGCCCCGAAGCCCAGTTGCTGAATAAGCAGATCTTTGA 18273 Query 76312 AACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTA 76371 ||| || ||| ||| | ||||||||||||||||||| | || | | | || |||| Sbjct 18274 AACGATTTATTACGGAGCCCTGGAGGCGAGTTGTGACCTCGCCAAGGAGTATGGCCCCTA 18333 Query 76372 TGAGACATTTGAGGGTTCTCC 76392 ||| |||| |||||| || || Sbjct 18334 TGAAACATATGAGGGATCACC 18354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595850532289760