Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value SEQ74076 131 6e-26 >SEQ74076 Length=228 Score = 131 bits (144), Expect = 6e-26 Identities = 156/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 31445 CCACCGCCCTGACTGTCGAGCATGGTCAGCGTCGCATTGAAGCCGTTCAACACCACTTCG 31504 || |||||| | | ||||||||||||||| | | |||||||| | || ||| || ||| Sbjct 21 CCGCCGCCCCGCCCGTCGAGCATGGTCAGGTTGGAGTTGAAGCCCTGCAGCACGACCTCG 80 Query 31505 GTTGTGTAGCGATCACCACCGTCGGAGTGCTG---CCACTTGCGGGTTTGCAGCTTGCCC 31561 || | ||| || | || | |||| || | ||| |||||||| |||| || |||| Sbjct 81 GTCGAGTACT--TCTCGAC-GCCGGACTGGTCGGTCCATTTGCGGGTCTGCAACTGGCCC 137 Query 31562 TCGATGTAAACCTTCGATCCCTTTTTCAGGTATTGCTCGCAAACCTTGACGAGACCTTCG 31621 |||||||| ||||| | ||||| ||||| || |||||| |||||| ||| || ||| Sbjct 138 TCGATGTACACCTTGGCGCCCTTCTTCAGATACTGCTCGGCGACCTTGCAGAGGCCCTCG 197 Query 31622 GTGAAGACGACGACGCTATGCCACTCGGT 31650 |||||| ||||||| ||||||||||| Sbjct 198 TTGAAGATCACGACGCGGTGCCACTCGGT 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169610361511536