Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value SEQ39802 297 1e-74 seq646 136 3e-26 SEQ32057 113 3e-19 SEQ50146 107 1e-17 SEQ81609 105 5e-17 SEQ15041 104 2e-16 SEQ58005 89.7 4e-12 seq3297 86.0 5e-11 >SEQ39802 Length=148537 Score = 297 bits (328), Expect = 1e-74 Identities = 954/1465 (65%), Gaps = 28/1465 (2%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| || || || || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 1940 GCAGAAACCTTGAGGATGCCATTGGCATCAGTGTCAAAGGTGACTTCAATCTGAGGGACA 1881 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | | || || | || ||| | | ||| |||| || || ||||| ||| Sbjct 1880 CCACGAGGTGCTGGAAGTATGCCTGTGAGTTCAAACTTTCCAAGCAGGTTGTTATCCTTA 1821 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | || ||| || | | || || || ||| || || || || || Sbjct 1820 GTCATGGCCCTTTTACCTTCATACACCTGAATGAGCACACCAGGCTGGTTGTCAGAGTAG 1761 Query 281606 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || || || | |||| | | || |||||| || || || | | || | || Sbjct 1760 GTGGTGAA-AGTCTGAGTCTGCTTGGTAGGAATGGTGGTATTGCACTTGATGAGGACAGT 1702 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | |||||||| ||||| | |||||| ||||||||||||||||| | || | | Sbjct 1701 CATGACTCCACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAACAGCAACAA 1642 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784 || |||| || ||| | | || | ||| ||||| || | ||| |||||||| Sbjct 1641 ATCCTGAACGTTCTCAGACTTGTCTCCTGATAAAATGGCTGCCTGGACAGCTGCACCATA 1582 Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 281844 ||||||||||||||||| |||| | | || |||| ||| || ||||| || | | Sbjct 1581 AGCAACAGCTTCATCAGGGTTAATGCTCTTGTTCAGTTCTTTCCCGTTGAAGAAGTCTTG 1522 Query 281845 AAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 281903 ||||| | ||| | ||| || || | || || || ||||| | ||||| ||||| | Sbjct 1521 CAGAAGCT-TCTGAATCTTGGGGATTCCAGTAGAACCACCAACCAGCACAATGTCATGAA 1463 Query 281904 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTC 281963 |||||| || || ||||| | ||| | | ||||| || || || || | | Sbjct 1462 TCTGTGACTTGTCAAGTTTGGCATCTCGAAGGGCCTTTTCTACAGGATCCAGTGTGCCAC 1403 Query 281964 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 282023 |||| || | | | ||| || ||| ||| | |||| || | || | |||| Sbjct 1402 GGAACAGCTCAGCATTCAATTCCTCAAATCAAGCACGGGTAATAGAGGTATAGAAGTCAA 1343 Query 282024 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC--GAAGAAGATAGTGCACG 282081 ||| || | | |||||||| ||||| | | || || | || ||| |||||| Sbjct 1342 ATCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGTGCAC- 1284 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGATTGATTCA 282137 ||||| |||||||| || || | || | | ||| | | || | |||| Sbjct 1283 -TTAGCCCGTTCACAGGCAGTACGGAGATGCCTGACAGCTCTCTTGTTCTCACTGATG-- 1227 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 282195 || | || | |||| || || || ||| || ||| | || | || ||||| Sbjct 1226 --TCCTTCTTGTGCTTTCATTTAAACTCAGCAATGCA--ATGGTTGACCATTCGGTTATC 1171 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 ||| ||||| || ||||| | || | ||| | || | | | |||| |||| ||||| Sbjct 1170 AAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTGGATTTCACTTCAAAAATGCCATC 1111 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 |||| | | | | ||||| || ||||| | || |||||||| || ||||| Sbjct 1110 CTCAATTGTGAGGATTGACACATCCAAAGTACCACCTCACAAGTCAAAAATCAGCACATT 1051 Query 282316 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 | |||| | || ||||| | |||||| |||| ||||||||||||||||||||| Sbjct 1050 CCTTTCAGCTCCAACCTTCTTATCTAAACCATAAGCAATAGCAGCAGCAGTTGGTTCATT 991 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 ||||||| | |||||||| |||||||| |||| |||||||| || || |||| || Sbjct 990 GATAATTCGAAGTACATTAAGGCCAGCAATAGTTCCAGCATCTTTTGTTGCCTGTCGCTG 931 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA 282495 || || || || || || || || || | || |||| || || || |||| || Sbjct 930 AGAGTCATTGAAGTAAGCTGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCAAGGTA 871 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAA 282553 || ||| ||| ||||| ||| | | || ||| || || | || ||||| |||| Sbjct 870 GGCTTCTGCAATTTCCTTCATCTTAGTGAGAACCATAGAGGACACTTCCTCTGGGTAGAA 811 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613 || || | || || ||| ||||| | | || | || |||| | Sbjct 810 ACTT--TTTGTCTCTCCTTTGTATTCTACTTGGACCTTGGGCCTGCCTGCATCATTCACC 753 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT-ACC 282672 || | || ||||| | |||||||| ||||||||| ||| | ||| || | | Sbjct 752 ACCATGAAGGGCCAGTGCTTCATATCAGATTGAACAACAGCATCA-TCAAACCTATGTTC 694 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 || | ||||| |||||||||| || ||||| || || | |||| | || | ||| || Sbjct 693 GATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGGTTTTTCGC 634 Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 ||||| ||||| ||| ||||||| || ||||| | |||||| ||||| || | || Sbjct 633 AGCATCCCCAATTAGACGTTCTGTGTCCGTAAAAGCAACATAGCTCGGAGTGGTTCAGTT 574 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG--CCATACACCTACACAACTA 282850 ||| || ||||| ||||| ||||| || || |||| || | ||||| ||||| Sbjct 573 ACCCTGGTCATTGGCAATTATTTCCACCTTTCCATGCTGGAAGACACACCCACACAGGAG 514 Query 282851 AAAGTTGTTCCTAAATCAATACCAA 282875 | || || || | |||||| |||| Sbjct 513 TAGGTGGTGCCAAGATCAATGCCAA 489 >seq646 Length=52088 Score = 136 bits (150), Expect = 3e-26 Identities = 764/1213 (63%), Gaps = 35/1213 (3%) Strand=Plus/Minus Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731 |||||||| ||||| | |||| | ||||||||||||||||| | || | | || ||| Sbjct 22264 CCACCAGCAGTTTCAACACCAGG-GAAAGAGGAGTGACATCTAACAGCAACAAATCCTGA 22206 Query 281732 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 | || ||| | | || | ||| ||||| | | ||| |||||||| |||||| Sbjct 22205 ACGTTCTCAGACTTGTCTCCTGATAAAATGGCTGCCGGGACAGCTGCACCATAAGCAACA 22146 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851 |||||||| || |||| | | ||| |||| || || ||||| || | | ||||| Sbjct 22145 GCTTCATCGGGGTTAATGTTCTTATTCAGTTCCTTTCCGTTGAAGAAGTCTTGCAGAAGC 22086 Query 281852 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| | ||| || || | || || || ||||| | ||||| ||||| | |||||| Sbjct 22085 T-TCTGAATCTTGGGGATTCTAGTAGAACCACCAACCAGAACAATGTCATGAATCTGTGA 22027 Query 281911 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAA 281970 || || ||||| | ||| | | ||||| | || || || | |||| Sbjct 22026 CTTGTCAAGTTTGGCATCTCGAAGGGCCTTTTCTATAGGATCCAGTGTGCCATGGAACAG 21967 Query 281971 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTC 282030 || | | | ||| || ||| ||| |||| || | || | ||| |||| || Sbjct 21966 CTCAGCATTGAATTCCTCAAATCGAGCATGGGTAACAGAGGTATAGAAGTCAGTTCCCTC 21907 Query 282031 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 282090 | | |||||||| ||| | | | || || || || || || ||||| | Sbjct 21906 ACAGAGAGAATCAATCTCAGTACTGGCCTGGGTGCTGGAGGAGAGGCTGCGCTTAGCCCA 21847 Query 282091 TTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATTGATTCAAATCTGTTT 282146 |||||| || || || | | | || ||| | || | |||| || | | Sbjct 21846 TTCACAGGCAGTATGGAGACACCTGACAGCTCTCTTGTTCTCACTGAT----GTCCTTCT 21791 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTC 282204 | | |||| || || || ||| | ||| | || | || |||||||| ||||| Sbjct 21790 TGTGCTTTCGTTTAAACTCAGCAATGAA--ATGGTTGACCATTCGGTTATCAAAGTCTTC 21733 Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 282264 || ||| | | || | || | || | | | || | |||| |||||| |||| | Sbjct 21732 TCCACCCTAGTGGGTGTCTCTAGCTGTTGATTTCACCTCAAAAATTCCATCCTCAATTGT 21673 Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 | | | ||||| || ||||| || | | ||||| || |||||| |||| Sbjct 21672 GAGGATTGACACATCGAAAGTACCACCGCCAAAGTAGAAAATCAGCACATTCCTTTCAGC 21613 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 | || | ||| |||||||| |||| ||||| |||| |||||| || |||||| Sbjct 21612 TCCAACCTTCTGATCCAGACCATAAGCAATCGCAGCGGCAGCTGGTTCGTTGGTAATTCG 21553 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 | | | || |||||| | |||| |||||||| || || |||| || || || || Sbjct 21552 AAGTCTACTGAGGCCAGCAGTAGTTCCAGCATCTTTTGTTGCCTGTCGCTGAGAGTCATT 21493 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGC 282504 || || || || || || | || |||| || || || |||| || || ||| Sbjct 21492 GAAGTAAGCTGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCAAGGTAGGCTTCTGC 21433 Query 282505 TGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTG 282562 ||| ||||| ||| | | || ||| || || | || ||||| |||| || || Sbjct 21432 AATTTCCTTCATCTTAGTGAGAACCATAGAGGACACTTCCTCTGGGTAGAAACTT--TTT 21375 Query 282563 GATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAAT 282622 | || || ||| ||||| | | || | || |||| | Sbjct 21374 GTCTCTCCTTTGTATTCTACTTGGACCTTGGGCCTGCCTGCATCATTCA----------- 21326 Query 282623 GGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATTAATCG 282681 || | |||||||| || |||||| ||| | |||||| | || || | | Sbjct 21325 ---CAGTGCTTCATATCAGACTGAACAACAGCATCA-TCAAATCTACGTCCGATCAGAAG 21270 Query 282682 TTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCC 282741 ||| |||||||||| || ||||| || || | |||| | |||| ||| | ||||| || Sbjct 21269 TTTGGCATCAAAAACTGTCTTGGTGGGGTTCATTGCAACCTGATTTTTCACAGCATCCCC 21210 Query 282742 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801 | | || ||||||| |||||||| | |||||| |||| || || ||||| | || Sbjct 21209 AGTTAGTCGTTCTGTGTCTGTAAAAGCAACATAGCTCAGAGTGGTTCGGTTACCCCGGTC 21150 Query 282802 ATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCC 282861 ||| ||||| ||||| | || |||| || | ||||| ||||| | || || || Sbjct 21149 ATTGGCAATTATTTCCATCTTTCCATGCTGGAAGACACCCACACAGGAGTAGGTGGTGCC 21090 Query 282862 TAAATCAATACCA 282874 | |||||| ||| Sbjct 21089 AAGATCAATGCCA 21077 >SEQ32057 Length=68597 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || ||||| | |||||| |||| ||||||||||||||||||||| ||||||| | ||| Sbjct 2041 TTCTTATCTAAACCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCGAAGTACA 1982 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 ||||| |||||||| |||| |||||||| || || |||| || || || || || || Sbjct 1981 TTAAGGCCAGCAATAGTTCCAGCATCTTTTGTTGCCTGTCGCTGAGAGTCATTGAAGTAA 1922 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || | || |||| Sbjct 1921 GCTGGCACTGTGACCACAGCAT 1900 Score = 89.7 bits (98), Expect = 4e-12 Identities = 355/552 (64%), Gaps = 14/552 (3%) Strand=Plus/Minus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| ||||||||||||||||| |||| | | || |||| ||| || ||||| Sbjct 2687 GCACCATAAGCAACAGCTTCATCAGGGTTAATGCTCTTGTTCAGTTCTTTCCCGTTGAAG 2628 Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 || | | ||||| | ||| | ||| || || | || || || ||||| | ||||| Sbjct 2627 AAGTCTTGCAGAAGCT-TCTGAATCTTGGGGATTCTAGTAGAACCACCAACCAGAACAAT 2569 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | |||||| || || ||||| | ||| | | ||||| || || || || Sbjct 2568 GTCATGAATCTGTGACTTGTCAAGTTTGGCATCTCGAAGGGCCTTTTCTACAGGATCCAG 2509 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 | | |||| ||| | | | ||| || ||| ||| | |||| || | || Sbjct 2508 TGTGCCACGGAACAGGTCAGCATTCAATTCCTCAAATCGAGCACGGGTAATAGAGGTATA 2449 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 | |||||||| || | | |||||||| ||||| | | || || || || || Sbjct 2448 GAAGTCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAG 2389 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATT 282131 | || ||||| |||||||| || || | || | | | || ||| | || | | Sbjct 2388 GGTGCGCTTAGCCCGTTCACAGGCAGTACGAAGACGCCTGACAGCTCTCTTGTTCTCACT 2329 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 282189 ||| || | || | |||| || || || ||| | ||| | || | || Sbjct 2328 GAT----GTCCTTCTTGTGCTTTCGTTTAAACTCAGCAATGAA--ATGGTTGACCATTCG 2275 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 |||||||| ||||| || ||||| | || | ||| | || | | | |||| |||| Sbjct 2274 GTTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTGGATTTCACTTCAAAAAT 2215 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 ||||| |||| | | | | |||||| || ||||| |||| |||||||| || Sbjct 2214 GCCATCCTCAATTGTGAGGATTGACACATCAAAAGTACCACCTCCCAAGTCAAAAATCAG 2155 Query 282310 TACATTCATTTC 282321 || ||| |||| Sbjct 2154 CACGTTCCTTTC 2143 >SEQ50146 Length=14376 Score = 107 bits (118), Expect = 1e-17 Identities = 272/410 (66%), Gaps = 4/410 (1%) Strand=Plus/Minus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| || || ||||||||||| | ||||| ||||||||||| |||||||| || | Sbjct 4367 ACATTGAGGATGCCATTGGCATCAATGTCAAAAGTGACTTCAATCTGAGGGACACCACGA 4308 Query 281492 TGAGCAGGTGGGATC--CCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGA 281549 | || || || || ||| | | ||| |||| || || ||||| || || | Sbjct 4307 GGTGCTGGAGGTATATGCCTGTGAGTTAAAACTTTCCAAGCAGGTTGTTATCCTTGGTCA 4248 Query 281550 ATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTG 281609 | |||||| || | | || || || ||| || || || || || || | Sbjct 4247 TGGCCCTTTCACCTTCATACACCTGAATGAGCACACCAGGCTGGTTGTCAGAGTAGGTGG 4188 Query 281610 TAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 281668 |||| | |||| | | || |||||| || || || | | || | ||||| Sbjct 4187 TAAA-AGTCTGAGTCTGCTTGGTAGGAATGGTGGTATTGCGCTTGATGAGGACAGTCATG 4129 Query 281669 ATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 281728 | |||||||| ||||| | |||||| ||||||||||||||||| | || | | || Sbjct 4128 ACTCCACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAACAGCAACAAATCC 4069 Query 281729 TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 281788 |||| || ||| | | || | ||| ||||| || | ||| ||| |||| ||| Sbjct 4068 TGAATGTTCTCAGACTTGTCTCCTGATAAAATGGCTGCCTGGACAGCTGCAACATAAGCA 4009 Query 281789 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 |||||||||||||| |||| | | || |||| ||| || ||||| || Sbjct 4008 ACAGCTTCATCAGGGTTAATGCTCTTGTTCAGTTCTTTCCCGTTGAAGAA 3959 >SEQ81609 Length=287 Score = 105 bits (116), Expect = 5e-17 Identities = 184/266 (69%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 161537 TCATCTTTAACAAATGTAGTCAACATTAGTGAATACATTTCTCCATGAGCATTTTCCATT 161596 || ||||| ||| | ||| | || || |||||| |||| | |||| ||||||||| Sbjct 274 TCGTCTTTTACATAAGTATCTATCAAAAGCGAATACGTTTCACTATGAATATTTTCCAT- 216 Query 161597 GCATA--TTGGAAACCATAAGCACATTCAGCTTCTTTTATTTTCACAACATCAATAAGAT 161654 ||| |||||||||||| | ||| |||||| || ||| ||| || || || Sbjct 215 -CATGATTTGGAAACCATAGAAAAATTTAGCTTCGGCATATTGCACTTCATTAACAAAAT 157 Query 161655 TTTCTTTAATATTAGCATTAACAATACCATCAGCTGCCGCAAAAAATGCCAATACGTGCA 161714 | || || ||| ||||||| || || || | || || ||||| || | | || Sbjct 156 TCTCAGCAAGATTTTCATTAACGATTCCGTCTGAAGCTGCGAAAAAGGCAAGAATATGTT 97 Query 161715 TAATAAAATTTCTATCATCATCGCTCAAATGATTATTCCAATCATTCACATCTTTTGCCA 161774 | ||||| | | |||||||| | || | ||||||||| ||||| | ||||| || || Sbjct 96 TTATAAAGTAACGCTCATCATCATTTAACTTATTATTCCAGTCATTTAAATCTTGTGACA 37 Query 161775 AATCCACTTCTTCAACTGTCCAATAA 161800 | || | ||||||| |||||||| || Sbjct 36 AGTCAATTTCTTCAGCTGTCCAAAAA 11 >SEQ15041 Length=190731 Score = 104 bits (114), Expect = 2e-16 Identities = 217/318 (68%), Gaps = 18/318 (6%) Strand=Plus/Plus Query 281254 GTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCT 281311 || || ||| |||| |||||||| | | |||| || ||| ||| ||| || ||| Sbjct 23734 GTAAGCATAGCTTTCCAATTCATTCCTGGTGTCAAT-GC-GCTCTTTGAGCTTTTTGTCT 23791 Query 281312 GCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGAGAA 281367 | || | || | | ||| || ||| ||| |||||||||| || ||||| | Sbjct 23792 TCCTCAGCGAACTTCTCAGCATCATTAACCATCCTCTCAATTTCTTCAGGTGTCAGACGA 23851 Query 281368 TCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGA---TTTATCAGC 281424 | || | | ||| ||||| || || || || ||| ||| || ||| || | Sbjct 23852 TTTT----GGTCATTGGTAATTGTGATTTTGTT---TTTATTTCCTGTACCTTTGTCTTC 23904 Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 || ||||| |||||||||||| |||| | ||||| |||||||||||||| || || Sbjct 23905 AGCTGTCACTCGAAGAATACCATTAACATCTATCTCAAAAGTGACTTCAATTTGGGGTAC 23964 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 ||| | ||||||| |||||||| || || |||||| |||||| || ||| ||||| Sbjct 23965 CCCACGAGGAGCAGGAGGGATCCCAGTCAGATCAAATGTACCCAGAAGATGATTGTCTTT 24024 Query 281545 AGTGAATTTTCGTTCACC 281562 || | ||||||||| Sbjct 24025 TGTTAGGGGTCGTTCACC 24042 >SEQ58005 Length=65375 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 400295 AATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTA 400354 ||||||| || || ||||| |||||||| ||||| ||||| | || | || || ||| Sbjct 13041 AATGTACGCTTATCTTGACTGAGGGAGACTCAGCCAAAACTCTGGCAGTTTCAGGTCTTG 13100 Query 400355 ATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTA 400414 ||| |||||||||| | ||||| || ||||| |||||||||||| | | ||||| Sbjct 13101 GTGTGGTTGGAAGAGACAAATATGGGGTATTCCCTCTTAGAGGAAAAATACTCAATGTGC 13160 Query 400415 GGGATGCTAGTCCTAAA 400431 | || ||| || |||| Sbjct 13161 GAGAAGCTTCTCATAAA 13177 >seq3297 Length=104533 Score = 86.0 bits (94), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| || || || ||||| ||||| ||||| ||||||||| | || || | ||||| Sbjct 57919 TGTTGTGGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTTAT 57978 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 |||||| || ||||| ||| | || || ||||| || ||||| || ||||| || || Sbjct 57979 TCATTATGGCGCTCCTAAGGAAATGGAGTCCTATTACCAGGAAATCGGCAGAGCTGGCCG 58038 Query 131296 TGATGGA 131302 ||||||| Sbjct 58039 TGATGGA 58045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3735896241800502