Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value SEQ43829 86.0 5e-12 >SEQ43829 Length=74093 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| | ||||| ||||| || ||| Sbjct 42243 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 42184 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | ||| || || || || | ||| || || || ||||||| ||| Sbjct 42183 GCAAAGATCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTC 42124 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || | || || | ||||| ||||| || Sbjct 42123 ACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTC 42064 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 42063 TTCACGAAGATTTGCAT 42047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424435015366824