Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07]
96,427 sequences; 2,311,471,749 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
SEQ38160 107 2e-18
SEQ28171 87.8 1e-12
>SEQ38160
Length=80719
Score = 107 bits (118), Expect = 2e-18
Identities = 119/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| |||||||||||||||||||| ||||| || ||| || || ||||| || |||||
Sbjct 57042 CCCGTGATGTGTGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACG 57101
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897
||||| |||||||| || || || || || ||||| || || || | | ||||
Sbjct 57102 CCTAGACCCATATCACCTGACCTCTGGTAAAGCTGGCAAGACAGCTCTCCATTCACCACA 57161
Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|| || | ||| || |||| |||||||||| |||||||
Sbjct 57162 TAGAACTCACAGAGGGCATGGCAAGGAGGCAGTGCCATC 57200
>SEQ28171
Length=118966
Score = 87.8 bits (96), Expect = 1e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 111791 CAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATAT 111850
|| ||||||| ||| | || || || ||||||||||| |||||||| || |||||||
Sbjct 106832 CACTCATGTAGGTGTGCAGGGCATAGCTGGCAATGTTAAAGGGCACACCCAGACCCATAT 106773
Query 111851 CTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAAA 111910
|||| || || || || ||||| || || || | | |||||| || | ||| |
Sbjct 106772 CTCCTGACCTCTGGTAAAGCTGGCAAGACAGCTCTCCATTCACCACATAGAACTCACAGA 106713
Query 111911 GTACATGACAAGGAGGCAATGCCATC 111936
| |||| |||||||||| |||||||
Sbjct 106712 GGGCATGGCAAGGAGGCAGTGCCATC 106687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391484983938601
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |