Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07]
96,427 sequences; 2,311,471,749 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43829 152 6e-32
SEQ23565 152 6e-32
SEQ35906 140 4e-28
seq1037 140 4e-28
SEQ13217 136 5e-27
SEQ28820 134 2e-26
SEQ23137 134 2e-26
SEQ11330 129 7e-25
SEQ31259 127 2e-24
SEQ57164 125 8e-24
SEQ11338 122 1e-22
SEQ50471 113 5e-20
SEQ12264 113 5e-20
SEQ37766 111 2e-19
SEQ25611 102 9e-17
SEQ18817 91.5 2e-13
SEQ27908 89.7 6e-13
SEQ37872 86.0 7e-12
SEQ52206 84.2 2e-11
SEQ32447 84.2 2e-11
SEQ46061 82.4 9e-11
SEQ32083 82.4 9e-11
>SEQ43829
Length=74093
Score = 152 bits (168), Expect = 6e-32
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| || ||||||||||| || || | ||||| ||| | |
Sbjct 42046 AATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAG 42105
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| || ||||||| || || ||||||||||| || ||||| || |||||
Sbjct 42106 TGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATTCCCCCTGACCA 42165
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || || ||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 42166 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 42225
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| ||||| || || || || || ||| | || ||
Sbjct 42226 CATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGCCT 42264
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || ||||||||||| || || | ||||| ||| | ||
Sbjct 42275 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTCGAGCCCAGT 42334
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || ||||||||||| || ||||| || ||||||
Sbjct 42335 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATTCCCCCTGACCAG 42394
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 42395 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 42454
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || ||| | || || | |||||
Sbjct 42455 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGCCTGAGGGGTGG 42501
>SEQ23565
Length=11847
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||| ||| | ||
Sbjct 9275 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 9216
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || ||||||||||| || || || || ||||||
Sbjct 9215 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 9156
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 9155 CAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 9096
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || |||||||| || || ||| | || || | |||||
Sbjct 9095 ATCCAGAAAGAGTCCACTCTACACCTGGTCCTTCGCCTCAGGGGTGG 9049
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||| ||| | ||
Sbjct 9503 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 9444
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || ||||||||||| || || || || ||||||
Sbjct 9443 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 9384
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 9383 CAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 9324
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || |||||||| || || ||| | || || | |||||
Sbjct 9323 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGAGGTGG 9277
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||| ||| | ||
Sbjct 9731 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 9672
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || ||||||||||| || || || || ||||||
Sbjct 9671 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 9612
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 9611 CAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 9552
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || |||||||| || || ||| | || || | |||||
Sbjct 9551 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGAGGTGG 9505
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || || || | || || || || || || || ||||| ||| | |
Sbjct 9960 AATGCAGATCTTCGTGAAAACCTTAACTGGTAAAACCATCACCCTAGAGGTCGAGCCCAG 9901
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| ||| | ||||| || || ||||||||||| || || || || |||||
Sbjct 9900 TGACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCA 9841
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || || ||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 9840 GCAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 9781
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || |||||||| || || ||| | || || | |||||
Sbjct 9780 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGAGGTGG 9733
>SEQ35906
Length=62346
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || ||||| || || || |||||||| |
Sbjct 33249 ATGCAGATTTTTGTGAAGACCCTTACGGGGAAGACCATCACACTCGAGGTTGAACCCTCG 33308
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||| ||||| ||||||||||| || | |
Sbjct 33309 GACACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCGG 33368
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| ||| | | | ||||| ||
Sbjct 33369 CAGAGACTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCCGTGCTTTGTCTGACTACAAC 33428
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||| |||||||| || ||| | || | |||||
Sbjct 33429 ATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGACTCTGTGGTGG 33475
>seq1037
Length=126922
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || ||||| || || ||||||||||| ||
Sbjct 82411 ATGCAGATTTTTGTGAAGACCCTTACGGGGAAGACCATCACGCTTGAGGTTGAATCCTCG 82470
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||| ||||| |||| |||| || |||
Sbjct 82471 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAAGAATATCTCCTGATCAG 82530
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| ||||| | | ||||| ||
Sbjct 82531 CAGAGACTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 82590
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || |||||||| || ||| | || | |||||
Sbjct 82591 ATTCAAAAGGAGTCTACCCTTCATCTTGTTTTGAGACTCCATGGTGG 82637
>SEQ13217
Length=170878
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || ||||| || || ||||||||||| ||
Sbjct 167304 ATGCAGATTTTTGTGAAGACCCTTACGGGGAAGACCATCACGCTTGAGGTTGAATCCTCG 167245
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || || || ||||| ||||||||||| || |||
Sbjct 167244 GACACTATAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGGAATTCCTCCTGATCAG 167185
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || | |||||| ||||| || || ||| ||||| | | ||||| ||
Sbjct 167184 CAGAGACTGATCTCTGCTGGAAAGCAGCTGGAAGATAGCCGTACTTTGTCTGACTACAAC 167125
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| || ||||| ||||| |||||||| || |||
Sbjct 167124 ATTCAGAAGGAGTCCACCCTTCATCTTGTGTTG 167092
>SEQ28820
Length=113666
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || | || ||||| || || || |||||||| |
Sbjct 62477 ATGCAGATTTTTGTGAAGACCCTGATGGGGAAGACCATCACGCTCGAGGTTGAACCCTCG 62418
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||| ||||| ||||||||||| || |||
Sbjct 62417 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 62358
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| ||||| | | ||||| ||
Sbjct 62357 CAGAGACTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 62298
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || |||||||| || ||| | || | |||||
Sbjct 62297 ATTCAAAAGGAGTCTACCCTTCATCTTGTGTTGAGACTCCATGGTGG 62251
>SEQ23137
Length=3047
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || || ||||| || || || |||||||| |
Sbjct 246 ATGCAGATTTTTGTGAAGACCCTGACGGGGAAGACCATCACGCTCGAGGTTGAACCCTCA 187
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||| ||||| ||||||||||| || |||
Sbjct 186 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 127
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || | |||||| ||||| || || |||| | ||| | | ||||| ||
Sbjct 126 CAGAGACTGATCTCTGCTGGAAAGCAGCTGGAAGATGGCCCTACTTTGTCTGACTACAAC 67
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || |||||||| || ||| | || || |||||
Sbjct 66 ATTCAAAAGGAGTCTACCCTTCATCTTGTGTTGAGACTCCGTGGTGG 20
>SEQ11330
Length=6390
Score = 129 bits (142), Expect = 7e-25
Identities = 134/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| || ||||||||||||||| | ||
Sbjct 5949 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 6008
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||||| || || || ||| |||| || || || || ||||||
Sbjct 6009 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACGAGGAAGGCATCCCACCTGACCAG 6068
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
||| | || || || ||||| ||||| || ||||||| || ||||| | |||||
Sbjct 6069 CAGAGGCTGATATTCGCTGGCAAGCAGCTGGAGGATGGCCGGACCCTGTCTGACTA 6124
>SEQ31259
Length=129631
Score = 127 bits (140), Expect = 2e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459
|| || ||||| || ||||| ||||| ||||| | ||||| || || || ||||||||
Sbjct 129452 ACCATGATGCAGATTTTTGTGAAGACCCTTACAGAGAAGACCATCACGCTCGAGGTTGAA 129393
Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519
| || | | | |||| | ||||| || || || || ||||| |||||||||||
Sbjct 129392 CCCTCGGACACTACAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGGAATTCCTCCT 129333
Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579
|| |||||| | || || |||||||| ||||| || || |||| ||||| | | |||
Sbjct 129332 GATCAGCAGAGACTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACTTTGTCTGAC 129273
Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || | |||||| | || || |||||||| || ||| | || | |||||
Sbjct 129272 TACAACATTCAAAAGCAGTCTACCCTTCATCTTGTGTTGAGACTCCATGGTGG 129220
>SEQ57164
Length=103104
Score = 125 bits (138), Expect = 8e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || ||||| || || || ||| ||| |
Sbjct 21300 ATGCAGATTTTTGTGAAGACCCTTACAGGGAAGACCATCACGCTCAAGGCTGAACCCTCA 21359
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||| ||||| ||||||||||| || |||
Sbjct 21360 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 21419
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || | |||||| ||||| || || ||| |||| | | ||||| ||
Sbjct 21420 CAGAGACTGATCTCTGCTGGAAAGCAGCTGGAAGATAGCTGTACTTTGTCTGACTACAAC 21479
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||||| |||||||| || ||| | || || |||||
Sbjct 21480 ATTCAGAAGGAGTCCACCCTTCATCTTGTGTTGAGACTCCGTGGTGG 21526
>SEQ11338
Length=128349
Score = 122 bits (134), Expect = 1e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| ||||| ||||| || ||||| |||| ||||||||||| |
Sbjct 63935 AATGCAGATTTTTGTGAAGACCCTTACAGGGAAGACCATTATGCTTGAGGTTGAACCCTC 63994
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | || | |||| |||||| | || ||||| ||||| ||||||||||| | ||
Sbjct 63995 GGACACTATAGAAAATGGAAAGGCTGAGATCCAGGATAAGGAAGGAATTCCTCCTGCTCA 64054
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || | |||||||| ||||| || || |||| ||| | | | ||||| ||
Sbjct 64055 GCAGAGACTGACCTTTGCTGGGAAGCAGCTGGAAGATGGCCGTTCTTTGTCTGACTACAA 64114
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611
| || ||||| ||||| || |||||
Sbjct 64115 CATTCAGAAGGAGTCCACCCTCCATCT 64141
>SEQ50471
Length=54286
Score = 113 bits (124), Expect = 5e-20
Identities = 163/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGC-TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||| || ||||| ||||| | ||| |||||| | || || |||||||| |
Sbjct 42080 ATGCAGATTTTTGTGAAGACCCGTTAGGTAGAAGACTGTCACGCTCGAGGTTGAACCCTC 42139
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | || | |||| | ||||| | || |||| ||||| ||||||||||| || ||
Sbjct 42140 GGACACTATAGAAAATGTAAAGGCCGAGATCGAGGATAAGGAAGGAATTCCTCCTGATCA 42199
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
| || | || || | |||||| ||||| || || |||| |||| || | ||||| ||
Sbjct 42200 GAAGAGACTGATCTCTGCTGGAAAGCACCTGGAAGATGGCCGTA--CTGTCTGACTACAA 42257
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||| |||||||| || ||| | || || |||||
Sbjct 42258 CATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGACTCCGTGGTGG 42305
>SEQ12264
Length=35191
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||| | || ||||| ||||| |||| || |||| || || ||||||||||| |
Sbjct 33801 AATGAAGATTTTTGTGAAGACCCTTATGGGGAAGATCATCACGCTTGAGGTTGAAACCTC 33860
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | | | |||| | ||||| || || ||||| ||| | ||||||||| | || ||
Sbjct 33861 AGACACTGTAGAAAATGTAAAGGCCAAGATCCAGGAAAAGTAAGGAATTCCTACTGATCA 33920
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || || ||||||| ||||||||| || ||| | || | | |||| ||
Sbjct 33921 GCAGAGGCTGATCTTTGCTGATAAGCAACTGGAAAATGGCCTTATTTTGCCTGACTGCAA 33980
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTG 27631
| |||||||| | ||| |||||||| || ||| | ||| | ||||
Sbjct 33981 CATTCAAAAGGAGTTCACCCTTCATCTTGTGTTGAGACTTAGTGGTG 34027
>SEQ37766
Length=173039
Score = 111 bits (122), Expect = 2e-19
Identities = 164/231 (71%), Gaps = 5/231 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || || ||||| || || || |||||||| |
Sbjct 157301 ATGCAGATTTTTGTGAAGACCCTGACGGGGAAGACCATCACGCTCGAGGTTGAACCCTCG 157242
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||| | || || ||||| ||||| ||||||||||| || |||
Sbjct 157241 GACACTATAGAAAATGTAAAGCC-AAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 157183
Query 27526 CAG----CGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
||| | || || |||||||| ||||| || || |||| | ||| | | |||||
Sbjct 157182 CAGAGACTGACTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCATACTTTGTCTGACTA 157123
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||| || || |||||||| || | | || || |||||
Sbjct 157122 CAACATTCAAAAGGAGTCTACCCTTCATCTTGTGCTAAGACTCCGTGGTGG 157072
>SEQ25611
Length=18984
Score = 102 bits (112), Expect = 9e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 27436 AAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATT 27495
|||| || || || |||||||| | || | ||| | ||| | | || ||| ||
Sbjct 14193 AAGATCATCACACTCGAGGTTGAACCCTCAGACACCATAGAAAACGTAATGGTTAAGATC 14134
Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555
|||| ||||| ||||||||||| || |||||| | || |||||||||||||||| ||
Sbjct 14133 AAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGGCTGTTTTTTGCTGGTAAGCAGCTG 14074
Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615
|| || ||||| | | ||||| || | |||||||| ||||| |||||||| ||
Sbjct 14073 GAATATTGCCGTACTTTGTCTGACTACAACATTCAAAAGGAGTCCACCCTTCATCTTGTG 14014
Query 27616 TTGCGTCTT 27624
||| | |||
Sbjct 14013 TTGAGACTT 14005
>SEQ18817
Length=114269
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| ||||| ||| |||||||||||||| ||||| ||||| | |||| |||||||||
Sbjct 113979 GCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCTGGATCATTTGCTGCTATATTCTGGCTA 113920
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833
|| ||| | ||||| ||||| || || | ||||| || |||||||||
Sbjct 113919 AAGAAGAGAGGCCTCATGCCTGGACTTACCTTTTCAAATGAGCTGATC 113872
>SEQ27908
Length=111759
Score = 89.7 bits (98), Expect = 6e-13
Identities = 163/233 (70%), Gaps = 7/233 (3%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG--T 27460
|| ||||| || || || |||| |||| || |||||| | || || |||| | |
Sbjct 107499 ATGATGCAGATTTTCGTGAAGAGCCTTATGGG-AAGACTGTCACGCTAGAGGATACCCCT 107441
Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520
||| | || || | |||| | |||||| | | |||||||| ||||||| ||| |
Sbjct 107440 CAGACGCTA-CA--GAAAATGTAAAGGCTGAGACCCAGGACAACAGAGGAATTCGTCCTG 107384
Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGAC 27579
|||||| | || | |||||||||||||| || || ||||| | ||| | | | |||
Sbjct 107383 CTCAGCAGAGGCTGACCTTTGCTGGTAAGCAGCTGGAAGATGACCATACTTCCATCTGAC 107324
Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || | |||||||| |||| |||||||| || || | |||| |||||
Sbjct 107323 TACAACATTCAAAAGGAGCCCACCCTTCATCTTGTGTTTAGACTTCATGGTGG 107271
>SEQ37872
Length=24990
Score = 86.0 bits (94), Expect = 7e-12
Identities = 147/212 (69%), Gaps = 5/212 (2%)
Strand=Plus/Minus
Query 27421 AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAAT 27480
|| || ||||| || ||||| || || || ||| |||| | |||| | | ||||
Sbjct 3749 AAAACCCTTACAGGGAAGACCATCACACTGGAGTTTGAACCCTTGGATA-CTGAGAAAAT 3691
Query 27481 TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTT 27540
| ||||| || || ||||| ||||| ||||||||| | | |||||| | || || |||
Sbjct 3690 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTTCTAATCAGCAGAGGCTGATCTTT 3631
Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCC 27600
||||||||||| || || ||| ||| | ||||| || | ||||||| |
Sbjct 3630 GCTGGTAAGCAGCTGGAAGATAGCTGTA----ATTTGACTACAACATTTAAAAGGAGCAC 3575
Query 27601 ACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||||||| || || | |||| |||||
Sbjct 3574 ACCCTTCATCTTGTGTTAAGACTTCATGGTGG 3543
Score = 86.0 bits (94), Expect = 7e-12
Identities = 147/212 (69%), Gaps = 5/212 (2%)
Strand=Plus/Minus
Query 27421 AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAAT 27480
|| || ||||| || ||||| || || || ||| |||| | |||| | | ||||
Sbjct 7306 AAAACCCTTACAGGGAAGACCATCACACTGGAGTTTGAACCCTTGGATA-CTGAGAAAAT 7248
Query 27481 TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTT 27540
| ||||| || || ||||| ||||| ||||||||| | | |||||| | || || |||
Sbjct 7247 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTTCTAATCAGCAGAGGCTGATCTTT 7188
Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCC 27600
||||||||||| || || ||| ||| | ||||| || | ||||||| |
Sbjct 7187 GCTGGTAAGCAGCTGGAAGATAGCTGTA----ATTTGACTACAACATTTAAAAGGAGCAC 7132
Query 27601 ACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||||||| || || | |||| |||||
Sbjct 7131 ACCCTTCATCTTGTGTTAAGACTTCATGGTGG 7100
>SEQ52206
Length=109474
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| || ||||||||||||||| | ||
Sbjct 89935 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 89994
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||| | ||| | ||||| || || || |||||||| ||
Sbjct 89995 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGG 90038
>SEQ32447
Length=59734
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|| || || ||||| ||||| ||||| | ||||| || || || ||||||| |
Sbjct 44173 ATACAGATTTTTGTGAAGACCCTTACTAGGAAGACCATCACACTCAAGGTTGAACCCTTG 44114
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | | | |||| ||||| || | ||| | ||||| |||||| ||| | |||
Sbjct 44113 GACATGACAGAAAATGCAAAGGCCAAGCTCCAGAATAAGGAAGGAATTTGTCCTGCTCAG 44054
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || | |||||||||||||| || || |||| | | | | | ||||| ||
Sbjct 44053 CAGAGGCTGACCTTTGCTGGTAAGCAGCTGGAAGATGGCCATGCTTTGTCTGACTACAAC 43994
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| ||||||||| |||| || ||||| ||
Sbjct 43993 ATTCAAAAGGAACCCACCCTCCATCTTGT 43965
>SEQ46061
Length=126728
Score = 82.4 bits (90), Expect = 9e-11
Identities = 98/132 (74%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| |||||||||||||||| || ||||| | || | ||||||||||||
Sbjct 73286 AAGATCCAGGATAAGGAGGGAATTCCTCTTGATCAGCAAGGGCTGCTCTTTGCTGGTAAG 73227
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| | ||||||| || ||| | | ||||| || | | ||||| ||||| ||||||
Sbjct 73226 CAGTTGGAGGATG-TCATACTTTGTCTGACTACAACATGTACAAGGAGTCCACCCTTCAT 73168
Query 27610 CTAGTCTTGCGT 27621
| || ||| ||
Sbjct 73167 CCTGTATTGAGT 73156
>SEQ32083
Length=112626
Score = 82.4 bits (90), Expect = 9e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 64715 AGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTA 64774
||||| | | || ||||| ||||||||||| ||||| ||||| || || || |
Sbjct 102688 AGCGTGTTGTGGCCTTTGCAGCGGTGGAAGGAATCTTCTTCTCTGGCTCTTTTGCATCGA 102629
Query 64775 TTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832
| |||||||| || |||||||| |||||||| || || ||||||| || ||||| ||
Sbjct 102628 TATTCTGGCTCAAGAAGCGGGGACTGATGCCCGGCCTTACGTTTTCCAATGAGCTTAT 102571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569622983488240
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |