Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07]
96,427 sequences; 2,311,471,749 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43829 154 1e-32
SEQ35906 141 7e-29
SEQ23137 140 2e-28
SEQ28820 136 3e-27
SEQ13217 136 3e-27
seq1037 132 3e-26
SEQ23565 127 1e-24
SEQ37766 123 2e-23
SEQ57164 122 6e-23
SEQ31259 122 6e-23
SEQ12264 114 9e-21
SEQ50471 109 4e-19
SEQ11338 109 4e-19
SEQ37872 91.5 1e-13
SEQ25611 91.5 1e-13
seq117 86.0 5e-12
SEQ45555 82.4 5e-11
SEQ45421 82.4 5e-11
SEQ12768 82.4 5e-11
>SEQ43829
Length=74093
Score = 154 bits (170), Expect = 1e-32
Identities = 175/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | |||||||| || || |||||| ||||||||||| ||
Sbjct 42277 CATGCCGCCCCTCAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTC 42218
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| ||||||||||||| | |||||| || |
Sbjct 42217 GGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGG 42158
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | ||||||||| ||| ||||| ||||| |||| | |||||||| || |
Sbjct 42157 GGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCAC-GTTCTCAATGGTGTCACTGGGCT 42099
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| || || |||||||||||||||||||||||
Sbjct 42098 CCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 42047
Score = 140 bits (154), Expect = 2e-28
Identities = 170/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | |||||||| || || |||||| ||||||||||| ||
Sbjct 42505 CATGCCACCCCTCAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTC 42446
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| ||||||||||||| | |||||| || |
Sbjct 42445 GGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGG 42386
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||||||||| ||| ||||| ||||| | | |||||||| || ||
Sbjct 42385 GGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 42326
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || || |||||||||||||| || ||||||
Sbjct 42325 GACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATG 42274
>SEQ35906
Length=62346
Score = 141 bits (156), Expect = 7e-29
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | | ||
Sbjct 33466 AGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGCACGG 33407
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || |||||||||||||| |||||||||| | |||| |||| | ||| | ||||||
Sbjct 33406 CCATCTTCCAGCTGCTTCCCAGCAAAGATCAGTCTCTGCCGATCAGGAGGAATTCCTTCC 33347
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| ||||| | || ||| ||||| | ||
Sbjct 33346 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTGTCCGAGGGTTCAACCTCGAGTGTG 33287
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| || || |||||
Sbjct 33286 ATGGTCTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 33249
>SEQ23137
Length=3047
Score = 140 bits (154), Expect = 2e-28
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178
||||||||||| || ||||| || ||||||||| |||||||| || | | | | | |
Sbjct 29 AGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGGG 88
Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238
| | || ||||||||||| || ||| |||||| | ||||||||| | ||| | |||||
Sbjct 89 C-CATCTTCCAGCTGCTTTCCAGCAGAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 147
Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
||| ||| ||||| ||| | || |||| ||||| | || ||| ||||| | |||
Sbjct 148 CTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCGAGCGT 207
Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| || || |||||
Sbjct 208 GATGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 246
>SEQ28820
Length=113666
Score = 136 bits (150), Expect = 3e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| || ||||||||| |||||||| || | | ||
Sbjct 62260 AGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 62319
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || |||||||||| | ||||||||| | ||| | ||||||
Sbjct 62320 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 62379
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| ||||| | || ||| ||||| | |||
Sbjct 62380 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 62439
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||| | ||||||||||| || || |||||
Sbjct 62440 ATGGTCTTCCCCATCAGGGTCTTCACAAAAATCTGCAT 62477
>SEQ13217
Length=170878
Score = 136 bits (150), Expect = 3e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178
||||||||||| || ||||| ||| |||||| || |||||||| || | | | | |
Sbjct 167087 AGTCTCAACACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGG 167146
Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238
|| || ||||||||||| || ||| |||||| | ||||||||| | ||| | |||||
Sbjct 167147 CTA-TCTTCCAGCTGCTTTCCAGCAGAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 167205
Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
||| || ||||| ||| | || |||| ||||| | |||||| ||||| | |||
Sbjct 167206 CTTATCTTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGATTCAACCTCAAGCGT 167265
Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| || || |||||
Sbjct 167266 GATGGTCTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 167304
>seq1037
Length=126922
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||||||| || || ||||| || ||||||||| |||||||| || | | ||
Sbjct 82628 AGTCTCAAAACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 82569
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || |||||||||| | ||||||||| | || | | ||||
Sbjct 82568 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGATATTCTTTCC 82509
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| ||||| | |||||| ||||| | |||
Sbjct 82508 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGATTCAACCTCAAGCGTG 82449
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| || || |||||
Sbjct 82448 ATGGTCTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 82411
>SEQ23565
Length=11847
Score = 127 bits (140), Expect = 1e-24
Identities = 170/234 (73%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 44105 TTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAA 44164
||||| || || || || | | |||||||| || ||| ||| || |||||||||||
Sbjct 9043 TTCATCCCACCCCTGAGGCGAAGGACCAGGTGTAGAGTGGACTCTTTCTGGATGTTGTAG 9102
Query 44165 TCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|||| || ||| | || ||||||||||| || |||||||||| | |||||| ||
Sbjct 9103 TCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCA 9162
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283
| || | |||||||| ||| ||||| ||| | | ||| | |||||||| ||
Sbjct 9163 GGGGGGATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTGGG 9221
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| || || ||||| || || ||||||||||| ||||| |||||
Sbjct 9222 CTCGACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 9275
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | |||||||| || ||| ||| || ||||||||||| ||
Sbjct 9273 CATCCCACCTCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTC 9332
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 9333 GGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGG 9392
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | | ||| | |||||||| || |
Sbjct 9393 GGGGATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTGGGCT 9451
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || ||||| || || ||||||||||| ||||| |||||
Sbjct 9452 CGACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 9503
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | |||||||| || ||| ||| || ||||||||||| ||
Sbjct 9501 CATCCCACCTCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTC 9560
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 9561 GGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGG 9620
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | | ||| | |||||||| || |
Sbjct 9621 GGGGATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTGGGCT 9679
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || ||||| || || ||||||||||| ||||| |||||
Sbjct 9680 CGACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 9731
Score = 114 bits (126), Expect = 9e-21
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | |||||||| || ||| ||| || ||||||||||| ||
Sbjct 9729 CATCCCACCTCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTC 9788
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 9789 GGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGG 9848
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | | ||| | |||||||| || |
Sbjct 9849 GGGGATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTGGGCT 9907
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | || || || || || || | ||| ||||||||||| |||||
Sbjct 9908 CGACCTCTAGGGTGATGGTTTTACCAGTTAAGGTTTTCACGAAGATCTGCAT 9959
>SEQ37766
Length=173039
Score = 123 bits (136), Expect = 2e-23
Identities = 165/225 (73%), Gaps = 11/225 (5%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GT-TGG 44176
||||| | ||| || ||||| || ||||||||| |||||||| || | | || |||
Sbjct 157081 AGTCTTAGCACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGG 157140
Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACG----CTGCTGATCTGAAGGCAC 44232
| | || ||||||||||| || |||||||||| | ||||||||| | ||| |
Sbjct 157141 C---CATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCAGTCTCTGCTGATCAGGAGGAAT 157197
Query 44233 ACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTC 44292
|||||||| ||| ||||| |||| | || |||| ||||| | || ||| |||||
Sbjct 157198 TCCTTCCTTATCCTGGATCTTG-GCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTC 157256
Query 44293 CACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| || ||||| ||||| ||||||||||| || || |||||
Sbjct 157257 GAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 157301
>SEQ57164
Length=103104
Score = 122 bits (134), Expect = 6e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178
||||||||||| || ||||| ||| |||||| || |||||||| || | | | | |
Sbjct 21517 AGTCTCAACACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACAG 21458
Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238
|| || ||||||||||| || ||| |||||| | ||||||||| | ||| | |||||
Sbjct 21457 CTA-TCTTCCAGCTGCTTTCCAGCAGAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 21399
Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
||| ||| ||||| ||| | || |||| ||||| | || ||| ||| | |||
Sbjct 21398 CTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAGCCTTGAGCGT 21339
Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || || ||||||||||| || || |||||
Sbjct 21338 GATGGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 21300
>SEQ31259
Length=129631
Score = 122 bits (134), Expect = 6e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| || || |||||| |||||||| || | | ||
Sbjct 129229 AGTCTCAACACAAGATGAAGGGTAGACTGCTTTTGAATGTTGTAGTCAGACAAAGTACGG 129288
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || |||||||||| | ||||||||| | ||| | ||||||
Sbjct 129289 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 129348
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| || ||||| ||| | || || | ||||| | || ||| ||||| | |||
Sbjct 129349 TTATCTTGGATCTTGGCCTTTACATTTTCTGTAGTGTCCGAGGGTTCAACCTCGAGCGTG 129408
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| ||||| | || ||||||||||| || || ||||| |||
Sbjct 129409 ATGGTCTTCTCTGTAAGGGTCTTCACAAAAATCTGCATCATG 129450
>SEQ12264
Length=35191
Score = 114 bits (126), Expect = 9e-21
Identities = 162/225 (72%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 44114 CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAG 44172
|| || ||||||||||| || ||||| ||| ||||||||| |||||| | || ||| |
Sbjct 34025 CCACTAAGTCTCAACACAAGATGAAGGGTGAACTCCTTTTGAATGTTGCAGTCAGGCAAA 33966
Query 44173 TTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCAC 44232
| || | | ||||| ||||| | |||||||||| | ||||||||| | ||| |
Sbjct 33965 ATAAGGC-CATTTTCCAGTTGCTTATCAGCAAAGATCAGCCTCTGCTGATCAGTAGGAAT 33907
Query 44233 ACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTC 44292
|||| ||||||| ||||| ||| | || ||| ||||| | || ||| |||||
Sbjct 33906 TCCTTACTTTTCCTGGATCTTGGCCTTTACATTTTCTACAGTGTCTGAGGTTTCAACCTC 33847
Query 44293 CACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| || |||| ||| | ||||||||||| || || | |||
Sbjct 33846 AAGCGTGATGATCTTCCCCATAAGGGTCTTCACAAAAATCTTCAT 33802
>SEQ50471
Length=54286
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | ||| ||
Sbjct 42296 AGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAGT--ACGG 42239
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || ||| |||||| | || |||||| | ||| | ||||||
Sbjct 42238 CCATCTTCCAGGTGCTTTCCAGCAGAGATCAGTCTCTTCTGATCAGGAGGAATTCCTTCC 42179
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| |||| ||| | || |||| ||||| | || ||| ||||| | |||
Sbjct 42178 TTATCCTCGATCTCGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 42119
Query 44300 ATCGTCTT-TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | || |||||||||| || || |||||
Sbjct 42118 ACAGTCTTCTACCTAACGGGTCTTCACAAAAATCTGCAT 42080
>SEQ11338
Length=128349
Score = 109 bits (120), Expect = 4e-19
Identities = 151/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191
|| || || ||| |||||| || |||||||| || | | || | || ||||||
Sbjct 64141 AGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGAACGGCCATCTTCCAGC 64082
Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251
|||||||| |||||| ||| | ||||||| | | ||| | |||||||| ||| |||
Sbjct 64081 TGCTTCCCAGCAAAGGTCAGTCTCTGCTGAGCAGGAGGAATTCCTTCCTTATCCTGGATC 64022
Query 44252 TTCTGC--TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309
| | || ||| || ||| ||| ||||| | || ||| ||||| | | |||| ||||| |
Sbjct 64021 T-CAGCCTTTCCATTTTC-TATAGTGTCCGAGGGTTCAACCTCAAGCATAATGGTCTTCC 63964
Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||||||| || || |||||
Sbjct 63963 CTGTAAGGGTCTTCACAAAAATCTGCAT 63936
>SEQ37872
Length=24990
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/204 (71%), Gaps = 7/204 (3%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||| ||||| || ||||| ||| |||||||| |||||||| || | || ||
Sbjct 3552 AGTCTTAACACAAGATGAAGGGTGTGCTCCTTTTAAATGTTGTAGTCA---AATTACAGC 3608
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || |||||||||| | |||||||| ||||| | ||||||
Sbjct 3609 TA-TCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATTAGAAGGAATTCCTTCC 3667
Query 44240 TTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
|| ||| ||||| ||| | || ||| | || || || ||| | ||||| ||
Sbjct 3668 TTATCCTGGATCTTGGCCTTTACATTTTCTCA--GTATCCAAGGGTTCAAACTCCAGTGT 3725
Query 44299 AATCGTCTTTCCCGTGAGGGTCTT 44322
|| ||||| || || ||||| ||
Sbjct 3726 GATGGTCTTCCCTGTAAGGGTTTT 3749
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/204 (71%), Gaps = 7/204 (3%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||| ||||| || ||||| ||| |||||||| |||||||| || | || ||
Sbjct 7109 AGTCTTAACACAAGATGAAGGGTGTGCTCCTTTTAAATGTTGTAGTCA---AATTACAGC 7165
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || |||||||||| | |||||||| ||||| | ||||||
Sbjct 7166 TA-TCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATTAGAAGGAATTCCTTCC 7224
Query 44240 TTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
|| ||| ||||| ||| | || ||| | || || || ||| | ||||| ||
Sbjct 7225 TTATCCTGGATCTTGGCCTTTACATTTTCTCA--GTATCCAAGGGTTCAAACTCCAGTGT 7282
Query 44299 AATCGTCTTTCCCGTGAGGGTCTT 44322
|| ||||| || || ||||| ||
Sbjct 7283 GATGGTCTTCCCTGTAAGGGTTTT 7306
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/134 (75%), Gaps = 4/134 (3%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||| ||||| || ||||| ||| |||||||| |||||||| || | || ||
Sbjct 480 AGTCTTAACACAAGATGAAGGGTGTGCTCCTTTTAAATGTTGTAGTCA---AATTACAGC 536
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || |||||||||| | |||||||| ||||| | ||||||
Sbjct 537 TA-TCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATTAGAAGGAATTCCTTCC 595
Query 44240 TTTTCCGTTATCTT 44253
|| ||| |||||
Sbjct 596 TTATCCTGGATCTT 609
>SEQ25611
Length=18984
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | | ||
Sbjct 14006 AGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 14065
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| ||||||||||| || ||||| | || | ||||||||| | ||| | ||||||
Sbjct 14066 CAATATTCCAGCTGCTTACCAGCAAAAAACAGCCTCTGCTGATCAGGAGGAATTCCTTCC 14125
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTC 44292
|| ||| | ||||| | | | || |||||||||| | || ||| |||||
Sbjct 14126 TTATCCTTGATCTTAACCATTACGTTTTCTATGGTGTCTGAGGGTTCAACCTC 14178
>seq117
Length=65476
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/216 (69%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTC 44181
||||||||| || ||||| ||| ||||||||| ||| |||| || | | || |
Sbjct 65181 TCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTACGACC 65122
Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241
|| ||||||||||| || | |||| ||| | |||||||| ||| | ||||||||
Sbjct 65121 ATCTTCCAGCTGCTTACCAGGAAAGGTCAGCCTCTGCTGATG---AGGAATTCCTTCCTT 65065
Query 44242 TTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301
||| | | | ||| | || || | ||||| | ||| ||||| | ||
Sbjct 65064 ATCCTGAAGCCTGGACTTAACATTTTCTGTAGTGTCCAACGGTTCAACCTCGGGCTCGAT 65005
Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| |||||||||||||||| ||||| |||||
Sbjct 65004 GGTCTTCTCCGTGAGGGTCTTCACAAAGATCTGCAT 64969
>SEQ45555
Length=172201
Score = 82.4 bits (90), Expect = 5e-11
Identities = 150/213 (70%), Gaps = 10/213 (5%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||||| |||| || ||||| ||| ||||||||| |||||||| | | || |||
Sbjct 107560 AGTCTCTACACAAGATGAAG-GTGGACTCCTTTTGAATGTTGTAGACAAAGTGT-GGC-- 107505
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| || ||||||||| | ||||| || ||| | ||||||
Sbjct 107504 -CATCTTCCAGCTGCTTACCAGCAAAGATCTGCCTCTGCTAAT---GAGGAATTCCTTCC 107449
Query 44240 TTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
|| || ||||| ||| | | ||| |||| ||||| || ||| ||||| | ||
Sbjct 107448 TTATCTTGGATCTTGGCCTTTACACGTT-CTATAGTGTCCAAGGGTTCAACCTCGAGTGT 107390
Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331
|| || | || || ||||||||||| || ||
Sbjct 107389 GATGGTGTGCCCTGTAAGGGTCTTCACAAAAAT 107357
>SEQ45421
Length=309261
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/229 (69%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 44114 CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGT 44173
|||||||| |||| ||||| | | || ||| || || ||||||||| | || | ||
Sbjct 257136 CCTCTCAGGCTCA-CACCATGGGCAGGGTGGACTTTTTCTGGATGTTGAAGTCAGACAGG 257078
Query 44174 TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACA 44233
|| | | || ||||||||||| || || | |||| | |||||| || | | |
Sbjct 257077 GTGCACCCATCCTCCAGCTGCTTGCCAGCGGATATCAGCCTCTGCTGGTCAGGTGAGATG 257018
Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTC 44292
|||||||| | ||||| |||| ||| | ||||||| || || |||||
Sbjct 257017 CCTTCCTTGGCTTGGATCTT-GGCTTTGGCATTCTCCATGGTGTTACTGGGCTCAACCTC 256959
Query 44293 CACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || ||||| ||||| |||||||||| |||||| |||||||||
Sbjct 256958 ACAAGTGATGGTCTTGCCCGTCAGGGTCTTCATGAAGATCTGCATGATG 256910
>SEQ12768
Length=14605
Score = 82.4 bits (90), Expect = 5e-11
Identities = 154/221 (70%), Gaps = 8/221 (4%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGT-TGG 44176
||||||||||| || ||||| ||| ||||||||| |||||||| || | |||| |||
Sbjct 8511 AGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGTATGG 8570
Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236
| | || ||| ||||| || |||||||||| | ||||||||| | || | |||
Sbjct 8571 C---CATCTTCCGTCTGCTAACCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCT 8627
Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296
| ||| | | ||| || |||| | || || | ||||| | | ||| |||| |
Sbjct 8628 TTCTTATTCTGGATC-TCGGCTTTTACATTTCTTTAGTGTCTG-GTGTTCATCCTCGAGG 8685
Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | ||||| || | | |||| |||| || || |||||
Sbjct 8686 GTGAGGGTCTTCCCTGAAAAGGTCATCACAAAAATCTGCAT 8726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359567337819459
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |