Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq154 147 3e-30 seq166 141 1e-28 seq219 118 1e-21 >seq154 Length=133307652 Score = 147 bits (162), Expect = 3e-30 Identities = 214/302 (71%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 9478 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 9537 |||||| || ||||| || | || | ||||||| || | || ||| | || || Sbjct 133038030 CTGTATTCCCTGGTGTTCATCGTCGGCCTCCTGGGCAACATGATGGTTGTGTTGATCCTC 133038089 Query 9538 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 9597 |||| |||| |||| | ||| | ||||| || | || | ||||||||||| ||| Sbjct 133038090 ATAAAGTACAGGAAGCTGCAAATTATGACTAATATCTACCTACTCAACTTGGCAATTTCT 133038149 Query 9598 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGAT 9657 ||| |||| ||||| || ||| | ||||| ||||| |||||| || ||| |||| Sbjct 133038150 GACCTGCTCTTTCTCTTCACTGTCCCATTCTGGATTCACTATGTT---CTGTGGAATGAG 133038206 Query 9658 TGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTAC 9717 ||| |||||| | | |||||||| ||||| || | | |||| || | ||||| Sbjct 133038207 TGGGGTTTTGGCCACTGCATGTGTAAAATGCTCTCTGGGCTTTATTACCTGGCCTTGTAC 133038266 Query 9718 AGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCT 9777 ||| || |||||| |||||||||||| ||| | |||||||| || ||| | || ||||| Sbjct 133038267 AGCGAGATCTTTTTCATCATCCTGCTGACAATCGACAGGTACCTGGCTATCGTTCATGCT 133038326 Query 9778 GT 9779 || Sbjct 133038327 GT 133038328 Score = 147 bits (162), Expect = 3e-30 Identities = 214/302 (71%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 176364 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 176423 |||||| || ||||| || | || | ||||||| || | || ||| | || || Sbjct 133038030 CTGTATTCCCTGGTGTTCATCGTCGGCCTCCTGGGCAACATGATGGTTGTGTTGATCCTC 133038089 Query 176424 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 176483 |||| |||| |||| | ||| | ||||| || | || | ||||||||||| ||| Sbjct 133038090 ATAAAGTACAGGAAGCTGCAAATTATGACTAATATCTACCTACTCAACTTGGCAATTTCT 133038149 Query 176484 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGAT 176543 ||| |||| ||||| || ||| | ||||| ||||| |||||| || ||| |||| Sbjct 133038150 GACCTGCTCTTTCTCTTCACTGTCCCATTCTGGATTCACTATGTT---CTGTGGAATGAG 133038206 Query 176544 TGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTAC 176603 ||| |||||| | | |||||||| ||||| || | | |||| || | ||||| Sbjct 133038207 TGGGGTTTTGGCCACTGCATGTGTAAAATGCTCTCTGGGCTTTATTACCTGGCCTTGTAC 133038266 Query 176604 AGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCT 176663 ||| || |||||| |||||||||||| ||| | |||||||| || ||| | || ||||| Sbjct 133038267 AGCGAGATCTTTTTCATCATCCTGCTGACAATCGACAGGTACCTGGCTATCGTTCATGCT 133038326 Query 176664 GT 176665 || Sbjct 133038327 GT 133038328 Score = 147 bits (162), Expect = 3e-30 Identities = 260/375 (69%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 9994 CCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCC 10053 ||||| |||||||||| | ||||||||| | ||| || | || ||| | || ||||| Sbjct 133038583 CCTCTCCTCATTATGGTTATCTGCTACTCAGGAATCATTAAAACTCTGCTTAGATGCCCC 133038642 Query 10054 AGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTT 10113 | || || || ||||||||||| ||| || ||||| ||||| | | || |||| || Sbjct 133038643 AATAAAAAAAAACACAAGGCCATCCAGCTTATTTTTGTTGTCATGATAGTCTTTTTTATT 133038702 Query 10114 TTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCAC-GCAACCCTTCTT-- 10170 |||||||| || |||||| | ||||| || |||||| | || ||| ||| | || || Sbjct 133038703 TTTTGGACTCCATACAACCTGGTTCTTCTTCTGTCTGCTTTCCACAGCA--CATTTTTGG 133038760 Query 10171 -AACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGT 10229 ||| || || ||| ||||| || ||||| |||| ||| | || | | Sbjct 133038761 AGACCAGCTGTCAGCA--GAGCATACACCTGGACCTGGCCATGCAAGTGACTGAGGTGAT 133038818 Query 10230 AGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAG 10289 || |||| ||||| || ||||| ||| | ||||| || || || || |||| ||| | Sbjct 133038819 TACCCACACCCACTGCTGTATCAATCCAATAATCTATGCCTTTGTTGGTGAGAGGTTCCG 133038878 Query 10290 AAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCC 10349 | |||||| | ||| ||||||| | ||||| |||||||| | || || || | Sbjct 133038879 GAAACACCTTCGGCTCTTTTTCCACAGAAATGTGGCAATCTACCTGAGAAAATATATTTC 133038938 Query 10350 CTTCCTGTCTGGTGA 10364 ||||| |||| || Sbjct 133038939 ATTCCTTCCTGGCGA 133038953 Score = 147 bits (162), Expect = 3e-30 Identities = 260/375 (69%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 176880 CCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCC 176939 ||||| |||||||||| | ||||||||| | ||| || | || ||| | || ||||| Sbjct 133038583 CCTCTCCTCATTATGGTTATCTGCTACTCAGGAATCATTAAAACTCTGCTTAGATGCCCC 133038642 Query 176940 AGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTT 176999 | || || || ||||||||||| ||| || ||||| ||||| | | || |||| || Sbjct 133038643 AATAAAAAAAAACACAAGGCCATCCAGCTTATTTTTGTTGTCATGATAGTCTTTTTTATT 133038702 Query 177000 TTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCAC-GCAACCCTTCTT-- 177056 |||||||| || |||||| | ||||| || |||||| | || ||| ||| | || || Sbjct 133038703 TTTTGGACTCCATACAACCTGGTTCTTCTTCTGTCTGCTTTCCACAGCA--CATTTTTGG 133038760 Query 177057 -AACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGT 177115 ||| || || ||| ||||| || ||||| |||| ||| | || | | Sbjct 133038761 AGACCAGCTGTCAGCA--GAGCATACACCTGGACCTGGCCATGCAAGTGACTGAGGTGAT 133038818 Query 177116 AGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAG 177175 || |||| ||||| || ||||| ||| | ||||| || || || || |||| ||| | Sbjct 133038819 TACCCACACCCACTGCTGTATCAATCCAATAATCTATGCCTTTGTTGGTGAGAGGTTCCG 133038878 Query 177176 AAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCC 177235 | |||||| | ||| ||||||| | ||||| |||||||| | || || || | Sbjct 133038879 GAAACACCTTCGGCTCTTTTTCCACAGAAATGTGGCAATCTACCTGAGAAAATATATTTC 133038938 Query 177236 CTTCCTGTCTGGTGA 177250 ||||| |||| || Sbjct 133038939 ATTCCTTCCTGGCGA 133038953 Score = 95.1 bits (104), Expect = 1e-14 Identities = 225/338 (67%), Gaps = 3/338 (1%) Strand=Plus/Minus Query 176364 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 176423 ||||| ||| |||||| || |||| || | |||||| || | ||||| | | || Sbjct 133128170 CTGTACTCGCTGGTGTTTGTCATTGGTGTGATAGGCAATGTCCTGGTGGTTCTGGTGCTC 133128111 Query 176424 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 176483 ||| | || || | | |||| | || | ||| | ||||| ||| |||| | ||| Sbjct 133128110 ATACAACGCAAGAGGCTTCGAAACATGACCAGCATCTACCTGTTCAACCTGGCTGTCTCT 133128051 Query 176484 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGAT 176543 || || | ||||| || || | || || ||| | ||||||| | || | | || Sbjct 133128050 GATCTGGTCTTTCTATTCACACTACCTTTCTGGGTTGACTATATCGTAAA--AGGA-GAC 133127994 Query 176544 TGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTAC 176603 ||| ||||||| | || ||||||| | ||| || | | |||| || |||| Sbjct 133127993 TGGGTGTTTGGTAATGCCATGTGTAAGTTTCTCGCTGGATTTTATTACCTGGGCTTGTAT 133127934 Query 176604 AGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCT 176663 || | | |||| |||| |||||| ||| | || ||||| |||||||||||| ||||| Sbjct 133127933 AGTGACATGTTTTTTATCACCCTGCTTACAATTGATAGGTACCTAGCTGTTGTCCATGCT 133127874 Query 176664 GTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 176701 || |||| ||||| | || || || | |||||| Sbjct 133127873 GTGTTTGCTCTGAGGGCCCGGACTGTCACTTTTGGCAT 133127836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 225/338 (67%), Gaps = 3/338 (1%) Strand=Plus/Minus Query 9478 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 9537 ||||| ||| |||||| || |||| || | |||||| || | ||||| | | || Sbjct 133128170 CTGTACTCGCTGGTGTTTGTCATTGGTGTGATAGGCAATGTCCTGGTGGTTCTGGTGCTC 133128111 Query 9538 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 9597 ||| | || || | | |||| | || | ||| | ||||| ||| |||| | ||| Sbjct 133128110 ATACAACGCAAGAGGCTTCGAAACATGACCAGCATCTACCTGTTCAACCTGGCTGTCTCT 133128051 Query 9598 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGAT 9657 || || | ||||| || || | || || ||| | ||||||| | || | | || Sbjct 133128050 GATCTGGTCTTTCTATTCACACTACCTTTCTGGGTTGACTATATCGTAAA--AGGA-GAC 133127994 Query 9658 TGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTAC 9717 ||| ||||||| | || ||||||| | ||| || | | |||| || |||| Sbjct 133127993 TGGGTGTTTGGTAATGCCATGTGTAAGTTTCTCGCTGGATTTTATTACCTGGGCTTGTAT 133127934 Query 9718 AGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCT 9777 || | | |||| |||| |||||| ||| | || ||||| |||||||||||| ||||| Sbjct 133127933 AGTGACATGTTTTTTATCACCCTGCTTACAATTGATAGGTACCTAGCTGTTGTCCATGCT 133127874 Query 9778 GTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 9815 || |||| ||||| | || || || | |||||| Sbjct 133127873 GTGTTTGCTCTGAGGGCCCGGACTGTCACTTTTGGCAT 133127836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116 ||||||| | ||| ||| | ||||||||||||| ||||||| | | ||| ||| | || Sbjct 133213880 AAGAAGAGGCACAGGGCTGTAAGGCTCATCTTTGCCATCATGATTGTCTACTTTCTCTTC 133213939 Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT---CTTA-- 10171 ||||| |||||||||||||| ||||| ||| | ||||| || | | | || || | Sbjct 133213940 TGGACTCCCTACAACATTGTCCTCCTCCTGACCACCTTCCAGGAATACTTTGGACTGAAT 133213999 Query 10172 ACCTGCAGT-GTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTA 10230 | |||||| || | | || | ||| ||| ||| | | ||| | || | Sbjct 133214000 AATTGCAGTAGTTC------TAATAGACTAGACCAGGCAATGCAGGTGACAGAGACTCTT 133214053 Query 10231 GCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT 10286 | |||||||| ||| ||||||| || ||||| || || || ||||||||||| Sbjct 133214054 GGGATGACACACTGCTGCCTCAACCCTGTCATCTATGCCTTTGTTGGGGAGAAGTT 133214109 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002 ||||||| | ||| ||| | ||||||||||||| ||||||| | | ||| ||| | || Sbjct 133213880 AAGAAGAGGCACAGGGCTGTAAGGCTCATCTTTGCCATCATGATTGTCTACTTTCTCTTC 133213939 Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT---CTTA-- 177057 ||||| |||||||||||||| ||||| ||| | ||||| || | | | || || | Sbjct 133213940 TGGACTCCCTACAACATTGTCCTCCTCCTGACCACCTTCCAGGAATACTTTGGACTGAAT 133213999 Query 177058 ACCTGCAGT-GTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTA 177116 | |||||| || | | || | ||| ||| ||| | | ||| | || | Sbjct 133214000 AATTGCAGTAGTTC------TAATAGACTAGACCAGGCAATGCAGGTGACAGAGACTCTT 133214053 Query 177117 GCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT 177172 | |||||||| ||| ||||||| || ||||| || || || ||||||||||| Sbjct 133214054 GGGATGACACACTGCTGCCTCAACCCTGTCATCTATGCCTTTGTTGGGGAGAAGTT 133214109 Score = 84.2 bits (92), Expect = 3e-11 Identities = 231/348 (66%), Gaps = 11/348 (3%) Strand=Plus/Minus Query 176358 CCCGCCCTGTATCTGCTT-GTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGAT 176416 ||| ||||||| || || |||||| || |||| || | ||||||||| | |||||| Sbjct 132998033 CCCCCCCTGTA-CTCTTTCGTGTTTATCATTGGAGTGGTAGGCAATATCCT---GGTGAT 132997978 Query 176417 TATTGTCATAAGATA-CAT--GAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTT 176473 | | || | | | ||| || | | ||| | | || | ||| | ||||| ||| | Sbjct 132997977 TCTGGTGCTCATGCAGCATAGGAGGCTTCAAAGCATGACCAGCATATACCTGTTCAACCT 132997918 Query 176474 GGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAAT 176533 ||| | ||||| || | || ||||| ||||| || || ||||| |||| | | Sbjct 132997917 GGCTGTCTCTGATCTGGTCTTCCTTTTCACTTTACCTTTCTGGATTGACTACAAGC---T 132997861 Query 176534 GTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACAT 176593 | | | | ||| ||||||| | || ||||||| || ||| || | | |||| | Sbjct 132997860 GAAAGACAACTGGGTTTTTGGTGATGCCATGTGTAAGCTTCTCTCTGGGTTTTATTACCT 132997801 Query 176594 GTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGT 176653 | | ||||| || |||| | ||||||||||| ||| | |||||||| || || | Sbjct 132997800 GGGCTTATACAGTGAGATCTTCTTTATCATCCTGCTGACAATTGACAGGTACCTGGCCAT 132997741 Query 176654 TGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 176701 |||| |||| || | | ||||| |||| || || | |||||| Sbjct 132997740 TGTCCATGCAGTGTTTTCCCTGAGGGCCCGAACTGTCACTTTTGGCAT 132997693 Score = 84.2 bits (92), Expect = 3e-11 Identities = 231/348 (66%), Gaps = 11/348 (3%) Strand=Plus/Minus Query 9472 CCCGCCCTGTATCTGCTT-GTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGAT 9530 ||| ||||||| || || |||||| || |||| || | ||||||||| | |||||| Sbjct 132998033 CCCCCCCTGTA-CTCTTTCGTGTTTATCATTGGAGTGGTAGGCAATATCCT---GGTGAT 132997978 Query 9531 TATTGTCATAAGATA-CAT--GAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTT 9587 | | || | | | ||| || | | ||| | | || | ||| | ||||| ||| | Sbjct 132997977 TCTGGTGCTCATGCAGCATAGGAGGCTTCAAAGCATGACCAGCATATACCTGTTCAACCT 132997918 Query 9588 GGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAAT 9647 ||| | ||||| || | || ||||| ||||| || || ||||| |||| | | Sbjct 132997917 GGCTGTCTCTGATCTGGTCTTCCTTTTCACTTTACCTTTCTGGATTGACTACAAGC---T 132997861 Query 9648 GTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACAT 9707 | | | | ||| ||||||| | || ||||||| || ||| || | | |||| | Sbjct 132997860 GAAAGACAACTGGGTTTTTGGTGATGCCATGTGTAAGCTTCTCTCTGGGTTTTATTACCT 132997801 Query 9708 GTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGT 9767 | | ||||| || |||| | ||||||||||| ||| | |||||||| || || | Sbjct 132997800 GGGCTTATACAGTGAGATCTTCTTTATCATCCTGCTGACAATTGACAGGTACCTGGCCAT 132997741 Query 9768 TGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 9815 |||| |||| || | | ||||| |||| || || | |||||| Sbjct 132997740 TGTCCATGCAGTGTTTTCCCTGAGGGCCCGAACTGTCACTTTTGGCAT 132997693 >seq166 Length=122095297 Score = 141 bits (156), Expect = 1e-28 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||||| || || | ||||||||||||||| | |||||||| |||||||||||| Sbjct 121921524 AGGCCCGTGATATGTGCAATCATGTAGGTCAGCAGAGCATAGCTGGCAATGTTGAAGGGC 121921583 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| ||||| || || || |||||||| |||||||| || |||||||| | || Sbjct 121921584 ACACCCAGACCCATATCTCCTGACCGCTGGTAAAGCTGGCAAGACAGCTCCCCATTCACC 121921643 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || || || || || ||| ||||| || ||||| ||||| Sbjct 121921644 ACATAAAATTGACAGAGGGCATGGCAAGGAGGCAGTGCCAT 121921684 >seq219 Length=114033958 Score = 118 bits (130), Expect = 1e-21 Identities = 124/162 (77%), Gaps = 7/162 (4%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||| | |||| | || |||||| || ||||| || |||||||| |||| | ||| Sbjct 47741060 CAGCGTCGCAGCTGTATCCAGAGGGTCTTCAGCTTCTCTCCCAGGGAATTCAAATGCTCC 47741001 Query 138142 TT--TTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACT 138199 || || |||| || |||||||| |||||||||||||| || |||||||||||| Sbjct 47741000 TTGATTTCTGG-----GCCATGGTTCTCTGCCTGGGGCATCACTTCTACCAGGTAAAACT 47740946 Query 138200 GGATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCTTAA 138241 |||||| || |||| ||| ||||| |||| |||||||| || Sbjct 47740945 TGATCATTTCTGACAAGGCTTGGCAACCCAAGTAACCCTAAA 47740904 Score = 107 bits (118), Expect = 2e-18 Identities = 83/96 (86%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTG-GTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACT 137980 ||| |||||||| |||| | |||| |||||| |||||| |||| |||||||||||||||| Sbjct 47743248 TCAATTTTTCAT-TTTGAGTGTCACGTAGGCTTCTATGCAGTTGATGAAGATGTCAAACT 47743190 Query 137981 CGCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 | |||||||||||||||| ||||| || ||||||| Sbjct 47743189 CATTCATGGCCTTGTAGACACCTTTGTCTTGGAGCT 47743154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069755958200