Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq206 145 6e-30 seq97 125 6e-24 seq174 122 7e-23 seq219 120 3e-22 seq232 118 9e-22 seq297 105 6e-18 seq243 91.5 1e-13 seq31 91.5 1e-13 seq312 89.7 4e-13 seq129 89.7 4e-13 seq154 87.8 2e-12 seq80 87.8 2e-12 >seq206 Length=52716770 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| ||||| ||||||||||| || ||||| ||||| | | Sbjct 36640449 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640390 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36640389 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640330 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36640329 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640270 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| |||||||| || ||||| ||||| ||||| || |||||| Sbjct 36640269 TCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCATT 36640222 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| ||||| ||||||||||| || ||||| ||||| | | Sbjct 36640677 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640618 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36640617 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640558 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36640557 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640498 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36640497 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640451 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| ||||| ||||||||||| || ||||| ||||| | | Sbjct 36640905 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640846 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36640845 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640786 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36640785 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640726 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36640725 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640679 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| ||||| ||||||||||| || ||||| ||||| | | Sbjct 36641817 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36641758 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36641757 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641698 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36641697 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641638 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36641637 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641591 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 36641361 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36641302 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36641301 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641242 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36641241 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641182 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36641181 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641135 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 36641589 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 36641530 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36641529 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641470 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36641469 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641410 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36641409 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641363 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 36642045 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 36641986 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36641985 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641926 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36641925 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641866 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36641865 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641819 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 36642273 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36642214 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36642213 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36642154 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36642153 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36642094 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36642093 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642047 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 36642501 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36642442 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36642441 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36642382 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36642381 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36642322 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36642321 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642275 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||||| || | || |||| |||| ||||||||||| || ||||| || || | | Sbjct 36641133 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGAC 36641074 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct 36641073 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641014 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | | || |||| |||||| Sbjct 36641013 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640954 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 36640953 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640907 Score = 100 bits (110), Expect = 2e-16 Identities = 157/224 (70%), Gaps = 13/224 (6%) Strand=Plus/Minus Query 20956 GCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTT 21015 |||| | ||||||| ||||| |||||||| || | ||||| |||| | |||||| | Sbjct 215868 GCAGACACAGCACCAGGTGCAAGGTGGACTCTTTCTAGATGTTGTAGTTGGACAGGGTGT 215809 Query 21016 GGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTT 21075 || | ||||||| |||||||| ||| | || || ||||||||||| ||| | ||||| Sbjct 215808 GGCCATCCTCCAAATGTTTGCCAGCAAATATCAG-CTCTGCTGGTCGGTGGG-ATGCCTT 215751 Query 21076 CCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGG 21135 || |||| |||| || | || || |||| |||||| | || | | Sbjct 215750 CCCTGTCTTGGATCATTATT-----------GATGGTGTCACTGGGCTCAATCTCAAGAG 215702 Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||||||||||| ||| ||||| | || || ||||| ||| Sbjct 215701 TAATGGTCTTGCCCATTAGGGTTTTCATGAAGATCTGCATGTTG 215658 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/224 (70%), Gaps = 13/224 (6%) Strand=Plus/Minus Query 20956 GCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTT 21015 |||| | ||||||| ||||| |||||||| || | ||||| |||| | |||| | | Sbjct 3362112 GCAGACACAGCACCAGGTGCAAGGTGGACTCTTTCTAGATGTTGTAGTTGGACAGGTTGT 3362053 Query 21016 GGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTT 21075 || | ||||||| |||||||| ||| | || || ||||||||||| ||| | ||||| Sbjct 3362052 GGCCATCCTCCAAATGTTTGCCAGCAAATATCAG-CTCTGCTGGTCGGTGGG-ATGCCTT 3361995 Query 21076 CCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGG 21135 || |||| |||| || | || || |||| |||||| | || | | Sbjct 3361994 CCCTGTCTTGGATCATTATT-----------GATGGTGTCACTGGGCTCAATCTCAAGAG 3361946 Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||||||||||| ||| ||||| | || || ||||| ||| Sbjct 3361945 TAATGGTCTTGCCCATTAGGGTTTTCATGAAGATCTGCATGTTG 3361902 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/216 (70%), Gaps = 13/216 (6%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||||| || ||||| || || ||||| |||| | |||||| ||| | ||| Sbjct 88135 AGCACCAGGTGCAAGGTTGACTCTTTCTGGATGTTGTAGTTGGACAGGGTGTGGCCATCC 88194 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| ||||||||| || | || || ||||||||||| ||| | ||||| |||||| Sbjct 88195 TCCAACTGTTTGCCAGCGAATATCAG-CTCTGCTGGTCGGTGGG-ATGCCTTACTTGTCT 88252 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||| || | || || |||| |||||| | || | ||||||||| Sbjct 88253 TGGATCATTATT-----------GATGGTGTCACTGGGCTCAATCTCAAGAGTAATGGTC 88301 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||| ||| || || | || || ||||| ||| Sbjct 88302 TTGCCCATTAGGGTATTCATGAAGATCTGCATGTTG 88337 >seq97 Length=173707219 Score = 125 bits (138), Expect = 6e-24 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| || ||||| || || ||||| || || | | Sbjct 138042953 CCCCTC--AGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGA 138042896 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| | Sbjct 138042895 GGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGA 138042836 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||| || || || |||||| ||||| | ||| || |||| ||||||| | Sbjct 138042835 TGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCT 138042776 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| ||| |||||||||||||| | || || || || ||||||||||||| Sbjct 138042775 CCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTGA 138042725 >seq174 Length=112626471 Score = 122 bits (134), Expect = 7e-23 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| || ||||| || || ||||| || || | | Sbjct 49699199 CCCCTC--AGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGA 49699256 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| | Sbjct 49699257 GGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGA 49699316 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||| || || || |||||| ||||| | ||| || |||| ||||||| | Sbjct 49699317 TGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCT 49699376 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| ||| |||||||||||||| | || || ||| | | ||||||||||| Sbjct 49699377 CCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAGAGAATTGCATTTTGA 49699427 Score = 116 bits (128), Expect = 3e-21 Identities = 162/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| || |||||||| || ||||| ||||| | | Sbjct 48881509 CCCCTC--AGGCGGAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGA 48881452 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| | Sbjct 48881451 GGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGA 48881392 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||| || || || |||||| ||||| | ||| || |||| ||||||| | Sbjct 48881391 TGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCT 48881332 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | | ||| |||||||||||||| | || || || || || ||||| Sbjct 48881331 CTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 48881286 Score = 113 bits (124), Expect = 4e-20 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| || ||||| || || ||||| || || | | Sbjct 48881737 CCCCTC--AGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGA 48881680 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| || | || |||||||| ||||| ||| | || || ||||||||||| ||| | Sbjct 48881679 GGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGA 48881620 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||| || || || |||||| ||||| | ||| || |||| ||||||| | Sbjct 48881619 TGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCT 48881560 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| ||| |||||||||||||| | || || || || || ||||| Sbjct 48881559 CCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 48881514 Score = 98.7 bits (108), Expect = 8e-16 Identities = 157/219 (72%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 ||| |||| |||| || ||||| || || ||||| ||||| | ||||| || | || Sbjct 48881047 GAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 48880988 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| ||| | || || ||||||||||| | ||| | ||| || | || Sbjct 48880987 TTCCAGCTGCTTGCC-GCAAAGATGAGCCTCTGCTGGTC-AGGGGGATGCCCTCTTAATC 48880930 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT-TCCACGGTAATGG 21141 | |||||| | ||||| | ||| || |||| ||| || || | ||| |||| Sbjct 48880929 CG-GATCTTG-GCTTCACGTTCTCGATGGTGTCACTGGGGGCCCACCTCTAGGGTGATGG 48880872 Query 21142 TCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||||||| || | || || || || ||||||||||||| Sbjct 48880871 TCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATTTTGA 48880833 >seq219 Length=114033958 Score = 120 bits (132), Expect = 3e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 20957 CAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTG 21016 ||| | ||| || | |||| || |||| || || ||||| ||||| | ||||| | Sbjct 14315714 CAGGCGGAGGACTAGGTGCAGGGTTGACTTTTTCTGGATGTTGTAGTCAGAGAGGGTGCG 14315773 Query 21017 GGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTC 21076 | | || |||||||| ||||| ||| | || || ||||||||||| ||| | ||| || Sbjct 14315774 GCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTC 14315833 Query 21077 CTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGT 21136 ||| || |||||| ||||| | || || |||| ||||||| |||| ||| Sbjct 14315834 CTTATCCTGGATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGT 14315893 Query 21137 AATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 |||||||||||||| | || || || || ||||||||||||| Sbjct 14315894 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTGA 14315937 >seq232 Length=115493446 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 ||| |||| |||| || ||||||| || ||| | || || | ||||| || | || Sbjct 36866022 GAGGACCAGGTGCAGGGTTGACTCCTCCTGGATGCTGTAATCAGAGAGGGTGCGGCCATC 36865963 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| ||| |||| || ||||||||||| ||| | || ||||| || Sbjct 36865962 TTCCAGCTGCTTGCCGGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCTCTCCTTATC 36865903 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | ||| || |||| ||||||| || | ||| ||||| Sbjct 36865902 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGT 36865843 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||||||||| | || || || || ||||||||||||| Sbjct 36865842 CTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTGA 36865805 >seq297 Length=62275575 Score = 105 bits (116), Expect = 6e-18 Identities = 157/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAG-TGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 ||||||| ||||| | ||||||| | || |||| ||||| | |||||| || | || Sbjct 30819931 AGCACCAGGTGCAAGGGTGGACTCTCTCTGGGTGTTGTAGTCGGACAGGGTGCGGCCATC 30819990 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||||||||||||||| ||| | || ||||||||||||| || ||| ||| ||||| |||| Sbjct 30819991 CTCCAGCTGTTTGCCGGCAAAGATCAGTCTCTGCTGGT-CAGGGGGACGACTTCCATGTC 30820049 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| || || | ||| | |||| || ||| || | || ||||| Sbjct 30820050 CTGGATCTTGGCCTTGACATTCTCGATGG--TCACTGGACTCGACCTCAAGAGTGATGGT 30820107 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 |||||| | | || || || || || ||||| ||||| Sbjct 30820108 CTTGCCCATCAGGGTCTTCACGAAGATCTGCATGTTGAA 30820146 >seq243 Length=111246239 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| |||||| |||||||| || || ||||| ||| | | Sbjct 82529585 CCACCGCGCAGTCGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGCTGTCAGAC 82529526 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | |||||| || ||||||| | | || || ||||||||||| || Sbjct 82529525 AGAGTGCGGCCATCCTCCTGCCGTTTGCCAGAGAATATCAGCCTCTGCTGGTCAGGTGGG 82529466 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | | || || | |||||| Sbjct 82529465 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACTTTCTCAATGGTGTCTCTGGGCTCGACC 82529406 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | || ||||||||||| || Sbjct 82529405 TCAAGAGTGATGGTCTTGCCCGT 82529383 >seq31 Length=266435125 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/224 (69%), Gaps = 13/224 (6%) Strand=Plus/Minus Query 20956 GCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTT 21015 |||| | ||||||| ||||| |||||||| || || ||||| |||| |||||||| | Sbjct 156757106 GCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTTGGCCAGGGTGT 156757047 Query 21016 GGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTT 21075 || ||||||| |||||||| || | || || |||||||||| ||| | ||||| Sbjct 156757046 GGCTCTCCTCCAAATGTTTGCCAGCGAATATCAG-CTCTGCTGGTAGGTGGG-ATGCCTT 156756989 Query 21076 CCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGG 21135 ||||||| |||| || | || || |||| || ||| | || | | Sbjct 156756988 CCTTGTCTCGGATCATTATT-----------GATGGTGTCACTGGACTCAATCTCAAGAG 156756940 Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||||||||||| ||| || || | || || ||||| ||| Sbjct 156756939 TAATGGTCTTGCCCATTAGGGTCTTCATGAAGATCTGCATGTTG 156756896 >seq312 Length=159970021 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| || ||||| || || ||||| || || | | Sbjct 54028823 CCCCTC--AGGCAGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGA 54028880 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| ||| | || |||||||| ||||| ||| | || || |||||||||| || ||| | Sbjct 54028881 GGGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGT-CAGGGGGA 54028939 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 || || || || |||||| |||| | ||| || ||| ||||||| | Sbjct 54028940 TACCCTCTTTATCCTGGATCTTGGCATTCATGTTCTCGATGGTGTCATTGGGCTCCACCT 54028999 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||| ||| ||| |||||| ||| | || || | || || || ||||| Sbjct 54029000 CCAGGGTGATGATCTTGCTGGTCAGGGTCTTCAAGAAGATCTGTTTTTTG 54029049 >seq129 Length=145729302 Score = 89.7 bits (98), Expect = 4e-13 Identities = 131/185 (71%), Gaps = 13/185 (7%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||||| || ||||| || || ||||| |||| | |||||| ||| | ||| Sbjct 21994106 AGCACCAGGTGCAAGGTTGACTCTTTCTGGATGTTGTAGTTGGACAGGGTGTGGCCATCC 21994047 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| ||||||||| || | || || ||||||||||| ||| | ||||| |||||| Sbjct 21994046 TCCAACTGTTTGCCAGCGAATATCAG-CTCTGCTGGTCGGTGGG-ATGCCTTACTTGTCT 21993989 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||| || | || || |||| |||||| | || | ||||||||| Sbjct 21993988 TGGATCATTATT-----------GATGGTGTCACAGGGCTCAATCTCAAGAGTAATGGTC 21993940 Query 21144 TTGCC 21148 ||||| Sbjct 21993939 TTGCC 21993935 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/224 (69%), Gaps = 13/224 (6%) Strand=Plus/Minus Query 20956 GCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTT 21015 |||| | |||| || ||||| |||||||| || || ||||| |||| | |||||| | Sbjct 22510635 GCAGACATAGCAGCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTTGGACAGGGTGT 22510576 Query 21016 GGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTT 21075 || | ||| | | ||||||||| || | || || ||||||||||| ||| | ||||| Sbjct 22510575 GGCCATCCACAAACTGTTTGCCAGCGAATATCAG-CTCTGCTGGTCGGTGGG-ATGCCTT 22510518 Query 21076 CCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGG 21135 ||||||| |||| || | || || |||| |||||| | || | | Sbjct 22510517 CCTTGTCTTGGATCATTATT-----------GATGGTGTCACTGGGCTCGATCTCAAGAG 22510469 Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||||||||||| ||| || || | || | ||||| ||| Sbjct 22510468 TAATGGTCTTGCCCATTAGGGTCTTCATGAAGCTCTGCATGTTG 22510425 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/216 (69%), Gaps = 13/216 (6%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 |||| || ||||| |||||||| || || ||||| |||| | |||||| ||| | ||| Sbjct 99452169 AGCAGCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTTGGACAGGGTGTGGCCATCC 99452228 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 ||| |||||||| | | || || |||||||| || ||| | |||||||||||| Sbjct 99452229 TCCCAATGTTTGCCAGTGAATATCAG-CTCTGCTGTTCGGTGGG-ATGCCTTCCTTGTCT 99452286 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||| || | || || |||| ||||| | || | ||||||||| Sbjct 99452287 TGGATCATTATT-----------GATGGTGTCACTGGGCTTGATCTCAAGAGTAATGGTC 99452335 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||| ||| || || | ||| || ||||| ||| Sbjct 99452336 TTGCCCATTAGGGTCTTCATAAAAATCTGCATGTTG 99452371 >seq154 Length=133307652 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/224 (69%), Gaps = 13/224 (6%) Strand=Plus/Minus Query 20956 GCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTT 21015 |||| | |||| || ||||| |||||||| || || ||||| |||| | |||||| | Sbjct 126807799 GCAGACATAGCAGCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTTGGACAGGGTGT 126807740 Query 21016 GGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTT 21075 || | ||| | | ||||||||| || | || || ||||||||||| ||| | ||||| Sbjct 126807739 GGCCATCCACAAACTGTTTGCCAGCGAATATCAG-CTCTGCTGGTCGGTGGG-ATGCCTT 126807682 Query 21076 CCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGG 21135 ||||||| |||| || | || || |||| |||||| | || | | Sbjct 126807681 CCTTGTCTTGGATCATTATT-----------GATGGTGTCACTGGGCTCGATCTCAAGAG 126807633 Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||||||||||| ||| || || | || | ||||| ||| Sbjct 126807632 TAATGGTCTTGCCCATTAGGGTCTTCATGAAGCTCTGCATGTTG 126807589 >seq80 Length=184226339 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 20965 GCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCT 21024 ||||| ||| | | |||| | || || |||| ||||| | |||||| || | |||| Sbjct 171061621 GCACCGGGTGCTAGGAGGACACTTTCTGGATGTCGTAGTCTGACAGGGTGCGGCCATCCT 171061680 Query 21025 CCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGG 21084 ||||||||||| | | | || || ||||| |||| || ||| |||||||||||||| Sbjct 171061681 CCAGCTGTTTGTCGTCGAATATCAGCCTCTGGTGGT-CAGGGGGACGCCTTCCTTGTCTT 171061739 Query 21085 CGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCT 21144 |||||| || | | | | | || |||| ||||| || | || ||||||| Sbjct 171061740 GGATCTTGGCCTTGATATTGTCTATGGTGTCACTGGGCTTGACCTCAAGAGTGATGGTCT 171061799 Query 21145 TGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| || | || || || || || ||||| ||| Sbjct 171061800 TGCCAGTCAGGGTCTTCACGAAGATCTGCATGTTG 171061834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422254285298780