Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq206 127 2e-24 seq97 107 2e-18 seq174 104 2e-17 seq219 100 2e-16 seq232 98.7 8e-16 seq297 87.8 1e-12 >seq206 Length=52716770 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36641343 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36641284 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36641283 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641224 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36641223 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641164 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36641163 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641134 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36641571 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 36641512 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36641511 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641452 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36641451 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641392 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36641391 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641362 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36642027 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 36641968 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36641967 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641908 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36641907 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641848 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36641847 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641818 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36642255 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36642196 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36642195 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36642136 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36642135 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36642076 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36642075 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36642046 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36642483 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36642424 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36642423 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36642364 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36642363 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36642304 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36642303 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36642274 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36640659 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36640600 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36640599 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640540 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36640539 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36640480 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36640479 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36640450 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36640887 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36640828 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36640827 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640768 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36640767 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36640708 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36640707 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36640678 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| |||||||| || ||| ||| | || ||| Sbjct 36641115 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGACAGGGTGCGGCCATCTTCC 36641056 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36641055 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640996 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36640995 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36640936 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36640935 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36640906 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36641799 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36641740 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36641739 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36641680 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 36641679 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTG 36641620 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 36641619 CCTGTCAGGGTCTTCACAAAGATCTGCATG 36641590 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||| ||| ||||||||| ||||||||||| ||| ||| | || ||| Sbjct 36640431 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCC 36640372 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| || ||| ||||| || || | |||||||||||| Sbjct 36640371 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 36640312 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||||| ||| || ||||| Sbjct 36640311 ATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTA 36640252 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || | || ||||||||||| ||||| Sbjct 36640251 CCAGTTAAGGTTTTCACAAAGATCTGCAT 36640223 >seq97 Length=173707219 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| || ||| ||||| |||||||| || Sbjct 138042957 GCCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGA 138042898 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| || || ||||| || || | || ||| ||||| || || Sbjct 138042897 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 138042838 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||||| || ||| || || ||| || | | | | |||| | |||||| Sbjct 138042837 GATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 138042778 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| ||| || |||||||| ||||| |||||||| ||||||||||| ||| Sbjct 138042777 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 138042726 >seq174 Length=112626471 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || ||||||||| ||||||||||| || ||| | || ||| Sbjct 48881494 ACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 48881435 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || || | || ||| ||||| || || | ||||| || ||| Sbjct 48881434 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGG 48881375 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||||||||| | ||| || |||||| Sbjct 48881374 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTG 48881315 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||| ||||| |||||| Sbjct 48881314 CCGGTCAGGGTCTTCACGAAGATCTGCATG 48881285 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| || ||| ||||| |||||||| || Sbjct 48881741 GCCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGA 48881682 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| || || ||||| || || | || ||| ||||| || || Sbjct 48881681 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 48881622 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||||| || ||| || || ||| || | | | | |||| | |||||| Sbjct 48881621 GATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 48881562 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||| || |||||||| ||||| |||||||| ||||| |||||| Sbjct 48881561 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 48881513 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || ||| ||||| |||||||| || || ||| | || ||| Sbjct 49699214 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 49699273 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || || | || ||| ||||| || || | ||||| || ||| Sbjct 49699274 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGG 49699333 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||||||||||| ||| || |||||| Sbjct 49699334 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 49699393 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| ||||||||| ||| |||||| ||| Sbjct 49699394 CCGGTCAGGGTCTTCACAGAGAATTGCATTTTG 49699426 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/217 (70%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || ||| ||||| ||||||||||| || ||| | || ||| Sbjct 48881043 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 48880984 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||| | || || | || ||| ||||| || || | ||||| | |||| | Sbjct 48880983 AGCTGCTTGCCG-CAAAGATGAGCCTCTGCTGGTCAGGGGG-ATGCCCTCTTAATCCGGA 48880926 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC-ACCTCCACGGTAATCGTCTT 45306 | || |||| || | | | | |||| | || ||||| | ||| || ||||| Sbjct 48880925 --TCTTGGCTTCACGTTCTCGATGGTGTCACTGGGGGCCCACCTCTAGGGTGATGGTCTT 48880868 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 ||||||||| |||||||| ||||||||||| ||| || Sbjct 48880867 GCCCGTCAGGGTCTTCACGAAGATTTGCATTTTGACT 48880831 >seq219 Length=114033958 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| || || ||||| ||||||||||| || ||| | || ||||| || Sbjct 14315729 GTGCAGGGTTGACTTTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTG 14315788 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | || ||| ||||| || || | |||||||| ||| || || Sbjct 14315789 CTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTT 14315848 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||||| ||| || |||||||| || Sbjct 14315849 GGCCTTCACGTTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGT 14315908 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||| |||||||| ||||||||||| ||| Sbjct 14315909 CAGGGTCTTCACGAAGATTTGCATTTTG 14315936 >seq232 Length=115493446 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| || ||||| ||| ||| |||| || Sbjct 36866037 GCCACCCCTCAGTGGGAGGACCAGGTGCAGGGTTGACTCCTCCTGGATGCTGTAATCAGA 36865978 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| || || ||||| || || | || ||| ||||| || || Sbjct 36865977 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATGAGCCTCTGCTGGTCAGGGGG 36865918 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | | |||||| ||| || || ||| || | | | | |||| | |||||| Sbjct 36865917 GATGCTCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCAC 36865858 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||| | ||| || |||||||| ||||| |||||||| ||||||||||| ||| Sbjct 36865857 CTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 36865806 >seq297 Length=62275575 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 45128 ACCAAGTGCA-GCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||| ||||| | ||| ||| |||| ||||||||||| ||| ||| | || || Sbjct 30819934 ACCAGGTGCAAGGGTGGACTCTCTCTGGGTGTTGTAGTCGGACAGGGTGCGGCCATCCTC 30819993 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| ||||| ||||| || |||| | ||| ||||| || || || | ||| ||||| Sbjct 30819994 CAGCTGTTTGCCGGCAAAGATCAGTCTCTGCTGGTCAGG-GGGACGACTTCCATGTCCTG 30820052 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | | ||| | ||| ||||| | || || ||||| Sbjct 30820053 GATCTTGGCCTTGACATTCTCGATG--GTCACTGGACTCGACCTCAAGAGTGATGGTCTT 30820110 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||| |||| |||||||| ||||| ||||||||| Sbjct 30820111 GCCCATCAGGGTCTTCACGAAGATCTGCATGTTG 30820144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070601695055