Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq232 569 3e-157 seq297 430 2e-115 seq129 145 1e-29 seq1 131 2e-25 seq117 111 2e-19 >seq232 Length=115493446 Score = 569 bits (630), Expect = 3e-157 Identities = 1478/2243 (66%), Gaps = 49/2243 (2%) Strand=Plus/Minus Query 64829 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 64888 ||||| || ||||| || || ||| |||||| | || | || ||| ||||| | Sbjct 76911775 CTTGTTCAGAGTGAAGTGGATTGGATTAACAGCGGGTCTTGTCCTTAAATAATACATCCG 76911716 Query 64889 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 64948 || |||| ||| | |||| || ||||| |||||||| ||||||||| || | || Sbjct 76911715 AGTCTTTAAACCCTGCTTCCAACCATAAAAGTGCATACTAGTTAGTTTGCCGTAGTTGGG 76911656 Query 64949 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 65008 || || |||||||| || | ||| || ||||||| || ||| | || || || || || Sbjct 76911655 CTCAGCAATATGGATGTTTAAAGACTGGCTTTGATTGACGAAAACGCCTCTCTCAGCTGC 76911596 Query 65009 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATC 65068 ||| || | | ||||| || | |||||||| || || ||| | | | |||| | | Sbjct 76911595 CATCTTGAGAACAGTCTTCTGAGAGATTTCCCACATGGTCTTACAGAGTTGCTTCAGGTT 76911536 Query 65069 TTCTGGAAGGTTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 65125 || |||| | || || |||||||||| ||| || | ||| ||| || || Sbjct 76911535 ATCAGGAATTTCTGGTAAGCTCTGAATGGAGCCATTGCAGGCAGTGATCTGATTTTTCAT 76911476 Query 65126 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 65185 ||| |||||||| || ||| || | | || | || | | ||||| || | || Sbjct 76911475 CTCTTCATTCCACAAACCCTGCTCAGTAAGATCTTTCAGTAAGCGAGGATTCACAATCTG 76911416 Query 65186 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 65245 ||||||||| ||||| ||||| | |||||| || ||||||| || | || | |||| Sbjct 76911415 AAATTCTCCTGACAAGACTCTGCAAGTGTAGATGCTACTGGTGTAAGCCTCAATGGACTG 76911356 Query 65246 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 65305 |||||| | || ||| ||||||||| | ||||| ||||| || || | | |||||| || Sbjct 76911355 ATTATTCCTCAGAATCTGAGCAGTTAAAGCAGTAGGCATTGGGGCAATAAGTAAACTGTT 76911296 Query 65306 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 65365 ||| | |||||| || || || | || ||| | | ||| | ||| || || | || Sbjct 76911295 TCTTATACCGTACTTTGCAATCTTCCCCTTGAGAAGCTTCCAGTCCCACAGGTCTGTAGG 76911236 Query 65366 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 65425 | ||| || |||||||| || ||| | ||||| |||| || Sbjct 76911235 AATAACATTCCACATATCATACTGAAGAATACCTTTGCTGACTGGAGATCCCTCATACGT 76911176 Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485 | || || || | | || ||||| ||||| || || || | || || |||||||| Sbjct 76911175 TTTGTCGGGGCCATATTCCTTGGCTAGGTCACAGCTGGCTTCCAGGGCTCCATAATAAAT 76911116 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAA 65545 |||||| ||||| | |||||||| || ||||| |||| ||| Sbjct 76911115 GGTTTCAAAGATTTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA-------------- 76911070 Query 65546 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 65605 | || || || ||||||| ||||| || ||||| || || || | ||| ||||| Sbjct 76911069 --GGATGAAAGCATCTGCTAGACCTTGTACCCCAATTCCAATGGGCCGATGGTGTTTATT 76911012 Query 65606 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 65665 || | | || ||||||||||| || || || ||||| || |||||||| ||||| Sbjct 76911011 TGATAAGTGTGCCTCTGGAATAGGGTAGTAGTTTATATCAATTATTTTATTCGGATTTTG 76910952 Query 65666 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATT---AC 65722 |||||| ||||| || || |||||| ||| ||| | | ||| | || Sbjct 76910951 GACAATGACTTTAGTGACTTCTGCCAGTTTCTCAAAGTCATACGTATGTTCTGGTGTGAC 76910892 Query 65723 AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG--CA 65780 ||||||| | || | ||| |||| ||||||| || ||||||| || | || Sbjct 76910891 CTACATGTTGAGAGCCAGAGAAGCCAAGTTACAAATTGCAACCTCATCTTCACTGGTGCA 76910832 Query 65781 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 65840 | |||||| || || || | || || ||||||||||| | || ||||| | Sbjct 76910831 ACTC----TATCTCCGTACACAGGTGGCTGCATTTGATGGTTCCCAGGTTCTGTTGGCTG 76910776 Query 65841 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 65900 ||||| || ||| || || || || ||| |||| ||||| || || |||||| Sbjct 76910775 CTCTTCGGGTCACAGAAGTCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGCCTGAGAC 76910716 Query 65901 TCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT-C 65958 | || || || | ||| | | || || | ||| | | ||| | | || | Sbjct 76910715 CCAATGATGGCGTACCAAAGCTGCT-GAACTTTTCACA-ACTTTTCAGACACGACCCTGC 76910658 Query 65959 TT-TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 66017 || ||||| | ||| || |||||||| |||||| |||| | ||||| |||||| Sbjct 76910657 TTCTCGTAACTTTCATATAACTTCTCGAACTCCTCTCCCTAAACCTCGTCCAGACCAGGA 76910598 Query 66018 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 66077 || |||| |||||||||| |||| || || | || ||||| ||||| |||||| Sbjct 76910597 CACTCATTGGGACACATCAGTGACCGGTCCTGGTTAGTCTCTACTCGCTTCATGAAGAGA 76910538 Query 66078 TCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 66137 | || |||| ||| || | || | ||| | | | ||||| || || ||||| ||| Sbjct 76910537 TTTGGGATCCGAAGTGCGAAGAAGAGATCCCACGCTTGCTGTTCTTCCTTGCCTGTGTTC 76910478 Query 66138 TTTTTAAGATCGAGGAACGCCATAATATCA-------TAATGCCACGGTTCCAAGTATAT 66190 || || | || |||||| | | || || | ||||| || | || ||| || Sbjct 76910477 TTCTTCAAGTCAAGGAACTCAAAGATGTCTAGGTGGTTGGTGCCAAGGCTTCAGGTAAAT 76910418 Query 66191 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 66250 || | | || || || |||||||| || ||||| | ||| | ||| ||||| |||| Sbjct 76910417 AGCAAATGCCCCCGGGCGCTTGTTTCCACCTTGATCCACGTAAC-AGCTGTGTTGTTATG 76910359 Query 66251 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 66310 ||||||| | ||| | || || ||| || | | || ||||| | || ||||| || Sbjct 76910358 TACTCTCAGCGTTGACACAAGACAATTAGAATTGCTGTTAGTCCCAGCAATGTAGCTACC 76910299 Query 66311 ACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 66370 | | || |||||| | | | | | || |||||||| || ||||| || || | Sbjct 76910298 AATGGCCCGAATACAATTCACGCA-ACACTGATTCCCCCAGCAGACTTAGAAATCAAGGA 76910240 Query 66371 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 | | || | |||||||| || ||||| || || ||| | |||| | | || || Sbjct 76910239 ATACTGCTTCAGAGTATCATAAATTCCCTCAATGCTGTCACCTTTCATACTCAAGAGGAA 76910180 Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490 ||||| ||||| || | | | | || || ||||| || | | ||||| || || || Sbjct 76910179 ACAGCGAGACAGCTGTGGGC-AGTGGTCCCAGCATTGAAGAGAATCGGAGAGGCTTGAGT 76910121 Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 66550 ||| || || ||||||||||||||||| || ||||| || | || ||||| || || Sbjct 76910120 AAATCACTTCTCAGAAAGTAGATTGTATGTTTCAATTGCAGCATCAATATCTTCTTTGTG 76910061 Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 66610 ||| || || | || | ||| ||||| ||||| |||| |||| | | || | || Sbjct 76910060 AATCCCCACAGATACCCTCATCAACATATGCTGCGGTCGTTCAGCCACTTTTCCACTGAT 76910001 Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 66670 |||||||| || || ||||| || ||||||||||| |||||||| || | | Sbjct 76910000 CTTCAACAAATATGACCGTTCCAGTGTCTTAAAACCAAAGTAGTTGTAAACGAAATTCCA 76909941 Query 66671 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA-TGGTAA 66729 || || ||||| | || || || | ||| |||| |||| | || | || | | Sbjct 76909940 GTCATAGATAATGGCAGAATTCAGGTGATCTTTATTAGCCATAACAATGTCAAGTGCTGA 76909881 Query 66730 TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCT 66789 ||| | | || ||||||| | | | || | ||||| | |||||| | | ||||| Sbjct 76909880 -ACTGGCCACCATGGGAGAATATCTGCTGTTGTGTGGATTCATGTAGTTGTAGAGATCCT 76909822 Query 66790 CCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 66849 ||||| | || | || | ||| |||||||||||||| | || || || || || || | Sbjct 76909821 CCATCCCATCGCCGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCGATCCTTG 76909762 Query 66850 CGGCTATAATGGCATAATCCGGATG--TTGTGTAGTA--CAAGTGGCTGCTATTTCGGCT 66905 | || | |||||||| || || || | | | ||| || ||||| ||| | || || Sbjct 76909761 CTGCCAGGATGGCATAGTCAGGGTGCTTCGCTTCGTAGTCAGGTGGCAGCTGTCTCAGCA 76909702 Query 66906 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATA 66965 ||||| ||||||| ||| || || || || ||| | | || |||||| | || ||||| Sbjct 76909701 GCCAGGGTGTCCAGTTCCACTGTGGTGACCCCACTGTGTAGGCCTTGGCTTACTTTCATG 76909642 Query 66966 GCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGA 67025 | || | | |||| | | | || | || | |||||||| | ||| || || Sbjct 76909641 GTGATCTGAGCAGGAGCAACAAAGTCCATATTGAGCCCATAACAGAGTTTCTGGATTCGT 76909582 Query 67026 GATGTGATTTTATCAAACATGAC 67048 ||||| ||||| |||||||| || Sbjct 76909581 GATGTAATTTTGTCAAACATAAC 76909559 >seq297 Length=62275575 Score = 430 bits (476), Expect = 2e-115 Identities = 632/892 (71%), Gaps = 7/892 (1%) Strand=Plus/Minus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||||| |||||||| | ||||| || || || || || || || || || ||||| ||| Sbjct 25392880 GACATTACTCCCATCCTCTGGTACTCGCCTACTCGCTTCTCAAAGAAGTTTGTTTTTCCT 25392821 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 |||| ||| ||||| |||||||| || |||||||| || || |||| || ||||| Sbjct 25392820 TCTAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAAAATCTTGTTAAAA 25392761 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 |||| || || | || || || ||||| || || || ||||||| ||| Sbjct 25392760 CCCAGCTCCAGCATAAGCCTGTCGGCCACAAACTCGATGTACTGCTTCATCAAGGTGCAA 25392701 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 ||||| || || || || || || || ||| | || || || || || || || |||| Sbjct 25392700 TTCATCCCGATGAGCTTCACAGGCAGGGCCTCTGTGAGGAACTCCTGCTCTATCCTGACC 25392641 Query 36092 GCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAA 36149 |||| || || || | ||||| | | || || || ||| | || || | Sbjct 25392640 GCGTTGGTAATTATTTCTTTTACTCTCTGCTCCGAGGGCTTGTGTACCAGG--TGCTTGA 25392583 Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 |||||| || || || || ||||| |||||||| ||||| ||||| | ||| ||||||| Sbjct 25392582 ACATCAGGCAGGCAAAGTCACAGTGCAGACCCTCATCTCTGCTAATAAGTTCATTGGAAA 25392523 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269 | || || || ||||| || || || || || ||||| ||||| || ||||| || |||| Sbjct 25392522 ATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCAGAATATTGATGCAAAAGAACCAG 25392463 Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCAC 36326 ||||||| ||||||||||| || || ||||| | || || |||||||| | | | Sbjct 25392462 AAAAGAAGATTCCTTCTACCGCAGCGAAGGCCACAACTCGTTCTCCATACGTAGCCTCTT 25392403 Query 36327 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 36386 |||| ||||| ||||| || |||||||| || ||||||||||||||||| | Sbjct 25392402 TGTCCCCAATCCAACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTCTCAA 25392343 Query 36387 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 36446 | || || |||||||| | | |||| || |||||||| || || ||||| | |||| Sbjct 25392342 TGGCGTTGAAGAGATATTCTCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAGAC 25392283 Query 36447 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 36506 | |||||||| || || ||||| || ||||| ||||| || || |||||||| | |||| Sbjct 25392282 TGTACATTTCGGAGTGTATGTTCTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCT 25392223 Query 36507 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566 | || | || |||||| | |||||| || | || || ||||| ||||| || |||| Sbjct 25392222 CTGTGACTTGAACTTCTTGGCTAAATCGCTCCACCAAGTTCTCATTGACTATGCCATCAC 25392163 Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTAT 36626 | || ||||| || |||| ||||| |||||||| | | || | |||| | || | Sbjct 25392162 TCGCCGCAAAGAAGGCCAGAACATGAGATATAAAATGTCTCTCATCTGGTTTCAGAGCTT 25392103 Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 ||| | | ||||| || || | ||||| || || | |||||||| || ||||| | Sbjct 25392102 CCCAGTGCTGAATATCCTTGGAAAGGTCCACCTCCTCGGCAGTCCAAAAGGAGGCCTCAG 25392043 Query 36687 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | || || ||||| | |||||| ||||| |||| || ||||| | ||| || Sbjct 25392042 CTTTCTTGTACATCTGCCAGATATCATGGTATTCGATGGGAAAGACAACGAA 25391991 >seq129 Length=145729302 Score = 145 bits (160), Expect = 1e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 ||| || |||||| | | |||| || || | ||| |||| ||| |||||||||||||| Sbjct 65002368 TTACTTTTTATTAACTGCGTCCAGAAACTTCAGCAGGTGCAGGAAGAGATTGATGATATC 65002309 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 |||||||| | |||| | || ||||| || |||||||| ||||| | || || || || Sbjct 65002308 CAAGTAGAGACTGATGGCAGCCAACACGTACTCTTCAGGTGAGAGTCTGTGCATCAGCGA 65002249 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 ||| ||||||||||| |||||||| ||||| | ||||| || | || | || |||||| Sbjct 65002248 GTGTGTGTCATAGATGATGAATCCACAGAAGAGGAGGGCACCTAGAGAGGCCAAGACCAG 65002189 Query 9407 CTCCACTGTTTCACT 9421 ||||| || | ||| Sbjct 65002188 TTCCACCGTCTGACT 65002174 Score = 138 bits (152), Expect = 1e-27 Identities = 102/119 (86%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||| | ||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct 65000497 CCTGCTCCGAATTTGCTGAAATCTCTCTTTGATTGTAGAGTATAGGCAGTCAAGCCAAGA 65000438 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||||||| |||||| || || || |||| ||| | |||| |||||||||||||||| Sbjct 65000437 AAGACTGCAGCAGTCAGTATAAACGCATGCAGAACCAGATGCCCATCATAGAAAGTAAC 65000379 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || || || || || | ||| || ||||| || || || ||||| ||||| | ||| || Sbjct 76759206 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGCCCAGGCATGAGGCCTCTCTTCTTT 76759265 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| ||||| | |||||||||||||| |||||||| |||||||| || || ||||| Sbjct 76759266 AGCCAGAATATAGCAGCAAATGATCCAGAGAAGAAAATCCCTTCTACAGCAGCGAAGGC 76759324 Score = 89.7 bits (98), Expect = 7e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || |||||||| ||||| |||||||| ||||||||||||||||||| ||||||| Sbjct 64988021 CCATGCGAATGTGCACGCTGGCCGACGCCACGCAGCTGCCATAGTTGAAGTCATCCTCGA 64987962 Query 9907 TGGAGGAGC 9915 |||| |||| Sbjct 64987961 TGGAAGAGC 64987953 >seq1 Length=282763074 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || |||||||| || || || | Sbjct 167557814 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTGTAAGGCTCAATG 167557755 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| |||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 167557754 GACTCATTATTCCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 167557695 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | |||||| Sbjct 167557694 CTGTTTCTTATACCGTA 167557678 Score = 105 bits (116), Expect = 9e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515 || || ||||| || | || ||||| ||||| |||||||| || ||||||||||||||| Sbjct 167546974 GTCCCAGCATTGAAGAGAGTCGGAGAGGCGTGAGTAAACCACTTCTCAGAAAGTAGATTG 167546915 Query 66516 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 66575 || || ||||| || | || ||||| || ||||| || || | || | ||| ||| Sbjct 167546914 TATGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 167546855 Query 66576 ATGTGCTGAGGTCTTTCA 66593 |||||||| ||||||||| Sbjct 167546854 ATGTGCTGTGGTCTTTCA 167546837 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 167560806 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTGGGCTCAGCGATATGGATGT 167560747 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 | | ||| || |||||||||||||| || || || || || ||||| || | | |||| Sbjct 167560746 TTAAAGACTGGCTTTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 167560687 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | || ||||| | |||| | || || |||| Sbjct 167560686 TCTGAGAGATTTCCCACACGGTCTTATAGAGCTGCTTCAGGTCCTCAGGAA 167560636 >seq117 Length=147991367 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | || |||||||| || || || ||||| || || || || | Sbjct 43887779 CCTCATCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCT 43887720 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || ||||||||||| ||||||||||| || || |||| Sbjct 43887719 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACCGCAGCGAAGG 43887660 Query 36300 CAATAAGTCTCTCTCC 36315 | | || || ||||| Sbjct 43887659 CCACAACTCGTTCTCC 43887644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164943062200