Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq206 113 4e-20 seq174 98.7 9e-16 seq55 91.5 1e-13 seq297 89.7 5e-13 seq286 84.2 2e-11 seq80 82.4 7e-11 seq1 82.4 7e-11 >seq206 Length=52716770 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| |||||| || || ||||| || | ||| || || | Sbjct 36640449 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640390 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36640389 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640330 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36640329 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640270 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| | |||||||||||||||||||| Sbjct 36640269 TCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 36640223 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| |||||| || || ||||| || | ||| || || | Sbjct 36640677 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640618 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36640617 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640558 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36640557 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640498 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36640497 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36640449 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| |||||| || || ||||| || | ||| || || | Sbjct 36640905 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36640846 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36640845 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36640786 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36640785 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640726 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36640725 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36640677 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| ||||| || || ||||| || | ||| ||||| | Sbjct 36641133 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGAC 36641074 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36641073 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641014 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36641013 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36640954 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36640953 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36640905 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | |||| |||| ||||| || || ||||| || | ||| || || | Sbjct 36641589 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 36641530 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36641529 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641470 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36641469 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641410 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36641409 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36641361 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| |||||| || || ||||| || | ||| || || | Sbjct 36641817 CCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36641758 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36641757 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641698 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36641697 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641638 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36641637 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36641589 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | |||| |||| ||||| || || ||||| || | ||| || || | Sbjct 36642045 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 36641986 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36641985 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641926 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36641925 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641866 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36641865 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36641817 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | |||| |||| ||||| || || ||||| || | ||| || || | Sbjct 36642501 CCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36642442 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36642441 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36642382 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36642381 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36642322 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36642321 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36642273 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| ||||| || || ||||| || | ||| || || | Sbjct 36641361 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36641302 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36641301 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36641242 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36641241 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36641182 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36641181 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36641133 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| ||||| || || ||||| || | ||| || || | Sbjct 36642273 CCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 36642214 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 36642213 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 36642154 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || ||||||||||| | | |||||| | | ||||| Sbjct 36642153 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACC 36642094 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||||||||||||||||| Sbjct 36642093 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATGC 36642045 >seq174 Length=112626471 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| || | |||| ||||| || || ||||| || | ||| || || Sbjct 48881512 CCGCCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 48881453 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || ||| ||||||| | || ||||| || || || Sbjct 48881452 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 48881393 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || ||||| || | || || ||||| ||| ||| |||||| | | || || Sbjct 48881392 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 48881333 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||| ||||||||||||| Sbjct 48881332 TCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATGC 48881284 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| || | |||| ||||| || || || || || | ||| ||||| Sbjct 48881740 CCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAG 48881681 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || ||| ||||||| | || ||||| || || || Sbjct 48881680 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 48881621 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || ||||| || | || || ||||| ||| ||| |||||| | | || || Sbjct 48881620 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 48881561 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||| ||||||||||||| Sbjct 48881560 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATGC 48881512 >seq55 Length=177699992 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| || |||||||| | ||| || || | | | | | ||| || |||| || || Sbjct 38853864 AGTGGACTCCTTTTGAATGTTGTAGTC--TGACAATACGGCCATCTTCTGGCTGCTTACC 38853921 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 ||||||| || ||||||||||| |||||||| ||||| || || | || || ||||| Sbjct 38853922 AGCAAAGATCAACCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 38853981 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 || | | | |||||| | | | || || || | | ||||||| || || | ||| | Sbjct 38853982 TACATCTTCTATAGTGTCCGAGGGTTCAACCTCGAGCATGATGGTCTTCCCTGGAAGGGC 38854041 Query 94990 TTTCACAAAGATCTGCA 95006 |||||||| ||||||| Sbjct 38854042 CTTCACAAAAATCTGCA 38854058 >seq297 Length=62275575 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAG-TAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 |||| ||||| |||||| | | || || | || ||| || ||| || ||| | Sbjct 30819928 CGCAGCACCAGGTGCAAGGGTGGACTCTCTCTGGGTGTTGTAGTCGGACAGGGTGCGGCC 30819987 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| ||| ||||||| | ||| ||||| || || ||| | |||| | Sbjct 30819988 ATCCTCCAGCTGTTTGCCGGCAAAGATCAGTCTCTGCTGGTCAGGGGGACGA-CTTCCAT 30820046 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || |||||||| || | |||| | ||||| |||| ||||| Sbjct 30820047 GTCCTGGATCTTGGCCTTGACATTCTCG--ATGGTCACTGGACTCGACCTCAAGAGTGAT 30820104 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || || | || || ||||| |||||||||||| Sbjct 30820105 GGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATG 30820141 >seq286 Length=88201929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || || ||| | || | ||| || |||||||| ||||| || || || ||| | Sbjct 25394600 TCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAACGTTGTAGTCAGACAAAGTACGGCC 25394659 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 | | |||||||| || || | || | || ||||||||||| |||||| | ||||| | Sbjct 25394660 ACCTTCCAGCTGCTTACCAGCGAATGTCAACCTTTGCTGATCAGGAGGAGTTCCTTCCTC 25394719 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || | ||||| || | | |||||| | | | || || || | | |||| Sbjct 25394720 ATCCTGGATCTGGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCATGAT 25394779 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || |||| || |||||||| |||||||| Sbjct 25394780 GGTCTTCCCTATAAGGGTCTTCACAAAAATCTGCAT 25394815 >seq80 Length=184226339 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/157 (72%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| || | || || | || || || || || ||| ||||| || Sbjct 171061676 ATCCTCCAGCTGTTTGTCGTCGAATATCAGCCTCTGGTGGTCAGGGGGACG-CCTTCCTT 171061734 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||||| | | | |||||| | | | ||| |||| ||||| Sbjct 171061735 GTCTTGGATCTTGGCCTTGATATTGTCTATGGTGTCACTGGGCTTGACCTCAAGAGTGAT 171061794 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || ||||| || || ||||| |||||||||||| Sbjct 171061795 GGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 171061831 >seq1 Length=282763074 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 43701 TTGAATAGCACCACGCCCACGTTTCCCCTATAGTCTTCGTCTATTACGCCCGCGCCTACG 43760 ||||| ||||| ||||| || ||||| ||||| ||||||||||| || || || ||||| Sbjct 48565311 TTGAACAGCACGACGCCGACATTTCCTCTATAATCTTCGTCTATGACACCGGCTCCTACA 48565370 Query 43761 TCTATTCCGTGACGTACTGCCAAGCCTGATCTGGCGGCCACCCTGCCATAATGTCCGTGA 43820 ||||| ||| ||| |||||||| || | | ||||| || || || || | Sbjct 48565371 TCTATGAAGTGCTTTACAGCCAAGCCAGAACGTGGAGCCACTCTTCCGTAGCACCCAGAA 48565430 Query 43821 GGCACGGCTACCCGTATGTCCGTTTTTACGAGG 43853 || || |||| | | ||||| || || || ||| Sbjct 48565431 GGAACAGCTATCTGAATGTCTGTCTTCACAAGG 48565463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285848523800