Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq232 127 1e-24 seq97 127 1e-24 seq1 127 1e-24 seq117 114 9e-21 seq914 113 3e-20 seq529 113 3e-20 seq297 107 1e-18 seq686 104 2e-17 seq80 104 2e-17 seq690 96.9 2e-15 seq918 95.1 8e-15 seq679 95.1 8e-15 seq206 95.1 8e-15 seq166 95.1 8e-15 seq154 95.1 8e-15 seq129 95.1 8e-15 seq31 95.1 8e-15 seq535 89.7 3e-13 seq258 87.8 1e-12 >seq232 Length=115493446 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 46524929 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 46524870 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 46524869 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 46524835 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 46652108 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 46652049 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 46652048 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 46652014 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 46654379 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 46654320 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 46654319 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 46654285 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 46647497 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 46647438 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 46647437 GCCGGTATTTAGCCTTA 46647421 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/75 (88%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTT-CAACTTTCCC-TCACGGTACTTGTTCGCTATCGGTCTC 20004 ||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||| Sbjct 46521726 CTCTCTCTTCAAAGTTCTTTTTCAACTTTCCCATTACGGTACTTGTTGGCTATCGGTCTC 46521667 Query 20005 GCGGTAATATTTAGC 20019 | | |||||||| Sbjct 46521666 GTGCCGGTATTTAGC 46521652 >seq97 Length=173707219 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 91140736 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 91140677 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 91140676 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 91140642 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 91136316 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 91136257 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 91136256 GCCGGTATTTAGCCTTA 91136240 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || |||||| || ||||| ||||||| Sbjct 123060094 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTATTGGCTATTGGTCTCGT 123060035 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 123060034 GCCGATATTTAGCCTTA 123060018 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 || ||| | ||| |||||| |||||||||||| ||||| ||||||||| ||| | || Sbjct 138628772 CAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATC 138628831 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || || || || || ||||| || | | || ||||| | || | ||||| || || Sbjct 138628832 TTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 138628891 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||| || |||||| || | || || || Sbjct 138628892 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 138628951 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || | ||| ||||| || |||||||| Sbjct 138628952 CTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 138628984 >seq1 Length=282763074 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 11973948 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 11973889 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 11973888 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 11973854 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 11974828 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 11974769 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 11974768 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 11974734 Score = 95.1 bits (104), Expect = 8e-15 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 63879684 CTCTGTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 63879625 Query 20007 GGTAATATTT 20016 | | ||||| Sbjct 63879624 GCCAGTATTT 63879615 Score = 95.1 bits (104), Expect = 8e-15 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 63959855 CTCTGTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 63959796 Query 20007 GGTAATATTT 20016 | | ||||| Sbjct 63959795 GCCAGTATTT 63959786 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||| |||||||| ||| || ||||||||| |||||||||||| Sbjct 147114094 CTCTCTCTTCAAAGTTCTTCTCAACTTTTCCTTACTGTACTTGTTGGCTATCGGTCTCCT 147114035 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 147114034 GCCGGTATTTAGCCTTA 147114018 >seq117 Length=147991367 Score = 114 bits (126), Expect = 9e-21 Identities = 83/95 (87%), Gaps = 7/95 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 30634877 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 30634818 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||||||||||| ||||||||| Sbjct 30634817 TCATCCATTCATGCGCGTCACTAA--AGATGACGA 30634785 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 30632238 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 30632179 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 30632178 GCCGGTATTTAGCCTTA 30632162 >seq914 Length=23475 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 9001 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 8942 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 8941 GCCAATATTTAGCTTTA 8925 >seq529 Length=9310 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 9045 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 8986 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 8985 GCCAATATTTAGCTTTA 8969 >seq297 Length=62275575 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 5835804 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 5835745 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 5835744 GCCGGTATTTAGCCTTA 5835728 >seq686 Length=64584 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||||| Sbjct 27023 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCGGTCTCGT 27082 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 27083 GCTGGTATTTAGCCTTA 27099 >seq80 Length=184226339 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 166662537 CTCTCCCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 166662596 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 166662597 GCCGGTATTTAGCCTTA 166662613 >seq690 Length=12708 Score = 96.9 bits (106), Expect = 2e-15 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||| ||||| ||| || ||||||||| ||||||||||||| | Sbjct 2538 CTCTCTTCAAAGTTCTTTTCCACTTTTCCTTACTGTACTTGTTGGCTATCGGTCTCGTGC 2479 Query 20009 TAATATTTAGCCTTATTATTGG 20030 | |||||||||||| ||||| Sbjct 2478 CAGTATTTAGCCTTA--ATTGG 2459 >seq918 Length=23674 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||| Sbjct 212 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCAGTCTCCT 271 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 272 GCCAGTATTTAGCCTTA 288 >seq679 Length=333641 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||| | Sbjct 125742 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCGGTCTTGT 125801 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 125802 GCCGGTATTTAGCCTTA 125818 >seq206 Length=52716770 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||| Sbjct 359010 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCAGTCTCCT 359069 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 359070 GCCAGTATTTAGCCTTA 359086 Score = 91.5 bits (100), Expect = 1e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||||||||| ||| || ||||||||| ||||||||||| | | Sbjct 441335 CTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCGGTCTTGTGC 441394 Query 20009 TAATATTTAGCCTTA 20023 |||||||||||| Sbjct 441395 CGGTATTTAGCCTTA 441409 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| ||||| |||||| Sbjct 328919 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATTGGTCTCAT 328978 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 328979 GCCGGTATTTAGCCTTA 328995 >seq166 Length=122095297 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||| Sbjct 7466138 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCAGTCTCCT 7466197 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 7466198 GCCAGTATTTAGCCTTA 7466214 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||| ||||||||||||||||||||||| ||| || ||||||||| |||||| ||||| Sbjct 7464612 CTCTTTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCAGTCTCCT 7464671 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 7464672 GCCAGTATTTAGCCTTA 7464688 >seq154 Length=133307652 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || |||||| || ||||| ||||||| Sbjct 126877943 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTATTGGCTATTGGTCTCGT 126877884 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 126877883 GCCGATATTTAGCCTTA 126877867 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || |||||| || ||||| ||||||| Sbjct 126884824 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTATTGGCTATTGGTCTCGT 126884765 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 126884764 GCCGATATTTAGCCTTA 126884748 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || |||||| || ||||| ||||||| Sbjct 126891944 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTATTGGCTATTGGTCTCGT 126891885 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 126891884 GCCGATATTTAGCCTTA 126891868 >seq129 Length=145729302 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||| | Sbjct 1678503 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCGGTCTTGT 1678444 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1678443 GCCGGTATTTAGCCTTA 1678427 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||||| |||||| |||||| Sbjct 99485216 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTATCTGTCTCGT 99485157 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 99485156 GCCGGTATTTAGCCTTA 99485140 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||| ||||| ||| || ||||||||| ||||| ||||||| Sbjct 1626599 CTCTCTCTTCAAAGTTCTTTTCCACTTTTCCTTACAGTACTTGTTGGCTATAGGTCTCGT 1626540 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1626539 GCCGGTATTTAGCCTTA 1626523 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||| |||||||| ||| || ||||||||| |||||||||||| Sbjct 99523282 CTCTCTCTTCAAAGTTCTTCTCAACTTTTCCTTACTGTACTTGTTGGCTATCGGTCTCCT 99523223 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 99523222 GCCGGTATTTAGCCTTA 99523206 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||| ||| ||||| |||||| Sbjct 19709 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTAGTTGGCTATTGGTCTCCT 19650 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 19649 GCCGGTATTTAGCCTTA 19633 Score = 86.0 bits (94), Expect = 4e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||||||||| ||| || ||||||||| ||| ||||||||| | Sbjct 712031 CTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGTTGGCTTTCGGTCTCGTGC 712090 Query 20009 TAATATTTAGCCTTA 20023 ||||| |||||| Sbjct 712091 CGGTATTTGGCCTTA 712105 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||| |||||||| ||| || ||||||||| ||||| |||||| Sbjct 22055930 CTCTCTCTTCAAAGTTCTTCTCAACTTTTCCTTACTGTACTTGTTGGCTATTGGTCTCCT 22055871 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 22055870 GCCGGTATTTAGCCTTA 22055854 >seq31 Length=266435125 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| || ||||||||| ||||| ||||||| Sbjct 128819113 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACTGTACTTGTTGGCTATTGGTCTCGT 128819054 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||| |||| Sbjct 128819053 GCCGGTATTTAGTCTTA 128819037 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||| ||| ||||| ||||||| Sbjct 410691 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTAGTTGGCTATTGGTCTCGT 410750 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 410751 GCCGGTATTTAGCCTTA 410767 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||||| | |||||| |||||| Sbjct 128827661 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTTGCTGGCTATCAGTCTCGT 128827602 Query 20007 GGTAATATTTAGCCTTA 20023 | | || ||||||||| Sbjct 128827601 GCCAGTAGTTAGCCTTA 128827585 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||| ||| |||||||||||| Sbjct 161560863 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTAGTTGGCTATCGGTCTCCT 161560804 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 161560803 GCAGGTATTTAGCCTTA 161560787 Score = 86.0 bits (94), Expect = 4e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||| ||||| ||| || ||||||||| | ||||||||||| | Sbjct 123205 CTCTCTTCAAAGTTCTTTTCCACTTTTCCTTACTGTACTTGTTGGGTATCGGTCTCGTGC 123264 Query 20009 TAATATTTAGCCTTA 20023 |||||||||||| Sbjct 123265 CGGTATTTAGCCTTA 123279 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||| ||| ||||| |||||| Sbjct 408613 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTAGTTGGCTATTGGTCTCCT 408672 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 408673 GCCGGTATTTAGCCTTA 408689 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||| ||| ||||| |||||| Sbjct 909378 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTAGTTGGCTATTGGTCTCCT 909319 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 909318 GCCGGTATTTAGCCTTA 909302 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || |||| ||| |||||||||||| Sbjct 161555823 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACCAGTTGGCTATCGGTCTCCT 161555764 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 161555763 GCAGGTATTTAGCCTTA 161555747 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||| ||| ||||| |||||| Sbjct 197211144 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTAGTTGGCTATTGGTCTCCT 197211085 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 197211084 GCCGGTATTTAGCCTTA 197211068 >seq535 Length=5328 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||| ||| || ||||| ||| |||||||||||| Sbjct 55 CTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTACTGTACTAGTTGGCTATCGGTCTCCT 114 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 115 GCAGGTATTTAGCCTTA 131 >seq258 Length=90668790 Score = 87.8 bits (96), Expect = 1e-12 Identities = 69/83 (83%), Gaps = 5/83 (6%) Strand=Plus/Minus Query 25914 TTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCAT 25968 ||| || |||||||||| |||||||| ||||| || ||||||||| |||| ||||| Sbjct 68296485 TTGCCTCTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCAT 68296426 Query 25969 GCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||| Sbjct 68296425 ACGCATCACTAATTAGATGACGA 68296403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943301528605