Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq206 114 1e-20 seq154 100 2e-16 seq97 98.7 8e-16 seq174 93.3 4e-14 seq219 91.5 1e-13 seq232 89.7 4e-13 seq80 89.7 4e-13 seq243 87.8 2e-12 seq117 84.2 2e-11 seq297 82.4 6e-11 >seq206 Length=52716770 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| ||||| ||||| || |||| || || || || ||| Sbjct 36640223 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAGACCATCACCCTGGAGGTCGAGCCCAGT 36640282 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36640283 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36640342 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36640343 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36640402 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36640403 ATCCAGAAGGAGTCCACC 36640420 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36640907 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36640966 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36640967 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641026 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || ||||||||| Sbjct 36641027 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGATTACAAC 36641086 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36641087 ATCCAGAAGGAGTCCACC 36641104 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36640451 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36640510 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36640511 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36640570 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36640571 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36640630 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36640631 ATCCAGAAGGAGTCCACC 36640648 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36640679 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36640738 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36640739 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36640798 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36640799 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36640858 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36640859 ATCCAGAAGGAGTCCACC 36640876 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36641135 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641194 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36641195 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641254 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36641255 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36641314 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36641315 ATCCAGAAGGAGTCCACC 36641332 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36641363 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641422 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36641423 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641482 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36641483 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 36641542 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36641543 ATCCAGAAGGAGTCCACC 36641560 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36641591 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641650 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36641651 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641710 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36641711 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36641770 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36641771 ATCCAGAAGGAGTCCACC 36641788 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36641819 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36641878 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36641879 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36641938 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36641939 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 36641998 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36641999 ATCCAGAAGGAGTCCACC 36642016 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36642047 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36642106 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36642107 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36642166 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36642167 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36642226 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36642227 ATCCAGAAGGAGTCCACC 36642244 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 36642275 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 36642334 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || || ||||||||||| || || || || || Sbjct 36642335 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 36642394 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 36642395 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGACTACAAC 36642454 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 36642455 ATCCAGAAGGAGTCCACC 36642472 >seq154 Length=133307652 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| || || ||||| || ||||| | || ||||| ||| ||||| Sbjct 35423401 AAGATCCAAGACAAGGAAGGAATCCCACCAGACCAACAGAGGCTGATATTCGCCAGCAAA 35423342 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| ||||||| || |||| | ||||| |||||||| || ||||| || ||| || Sbjct 35423341 CAGCTAGAGGAAGGCCACACCCTTTCCGACTACAACATCCAGAAAGAGTCTACCTGGCAC 35423282 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 |||| ||||| || |||| || Sbjct 35423281 CTAGTGTTGCGTCTGTGCGGTGG 35423259 >seq97 Length=173707219 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || |||||||| || || || || | ||||| || || |||| || || ||||| Sbjct 138042724 GTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 138042783 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | || | | || || || || || || ||||| || || || Sbjct 138042784 CCCAGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCT 138042843 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||||||||| ||| | || ||| ||||||| |||| ||| Sbjct 138042844 GACCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGAT 138042903 Query 22393 TACAACATTCAAAAAGAATCCACC 22416 |||||||| || ||||| || ||| Sbjct 138042904 TACAACATCCAGAAAGAGTCAACC 138042927 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| |||||||| || || | || || || || |||| || || || ||| || | Sbjct 138628985 GATGCAGATTTTTGTGAAGACCCTTACAGGGAAGACCATCACGCTCGAGGTTGAACCCTC 138628926 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | || || || || || ||||| || ||||| || ||||| Sbjct 138628925 GGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 138628866 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || ||||| || || ||||| || ||| ||| || | || || ||||| Sbjct 138628865 GCAGAGGTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGTACTTTGTCTGACTACAA 138628806 Query 22398 CATTCAAAAAGAATCCAC 22415 ||||||||| || ||||| Sbjct 138628805 CATTCAAAAGGAGTCCAC 138628788 >seq174 Length=112626471 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || |||||| | | ||| || || | ||||| || || |||| || || ||||| Sbjct 49699428 GTCAAAATGCAATTCTCTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 49699369 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | || | | || || || || || || ||||| || || || Sbjct 49699368 CCCAGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCT 49699309 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||||||||| ||| | || ||| ||||||| |||| ||| Sbjct 49699308 GACCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGAT 49699249 Query 22393 TACAACATTCAAAAAGAATCCACC 22416 |||||||| || ||||| || ||| Sbjct 49699248 TACAACATCCAGAAAGAGTCAACC 49699225 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| Sbjct 48881514 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 48881573 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || || ||||| || || || || || Sbjct 48881574 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 48881633 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||| ||| | || ||| ||||||| |||| ||||||||| Sbjct 48881634 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAC 48881693 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| || ||| Sbjct 48881694 ATCCAGAAAGAGTCAACC 48881711 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| Sbjct 48881286 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCCAGT 48881345 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || || ||||| || || || || || Sbjct 48881346 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 48881405 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||| ||| | || ||| ||||||| |||| || |||||| Sbjct 48881406 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 48881465 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 48881466 ATCCAGAAGGAGTCAACC 48881483 >seq219 Length=114033958 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || |||||||| || || || || | ||||| || || |||| || || ||||| Sbjct 14315938 GTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 14315879 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | | | | || || || || || |||||||| || || || Sbjct 14315878 CCCAGTGACACCATCAAGAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCT 14315819 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||||||||| ||| | || ||| ||||||| |||| || Sbjct 14315818 GACCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGAC 14315759 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || ||| | || ||| | || |||| Sbjct 14315758 TACAACATCCAGAAAAAGTCAACCCTGCACCTAGT 14315724 >seq232 Length=115493446 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || |||||||| || || || || | ||||| || || |||| || || ||||| Sbjct 36865804 GTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAG 36865863 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | || || | || || || || || |||||| | || || || Sbjct 36865864 CCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGAGCATCCCCCCT 36865923 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||||||||| ||| | || ||| ||||||| |||| ||| Sbjct 36865924 GACCAGCAGAGGCTCATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGAT 36865983 Query 22393 TACAACATTCAAAAAGAATCCACC 22416 |||| ||| || | || || ||| Sbjct 36865984 TACAGCATCCAGGAGGAGTCAACC 36866007 >seq80 Length=184226339 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | || || || || |||||||||| || | || Sbjct 171061833 AACATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCAAGCCC 171061774 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| ||||||| || || ||||||||||| || ||| || || Sbjct 171061773 AGTGACACCATAGACAATATCAAGGCCAAGATCCAAGACAAGGAAGG-CGTCCCCCTGAC 171061715 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || ||||| | || ||||||| | |||||| ||||||| | || || ||| Sbjct 171061714 CACCAGAGGCTGATATTCGACGACAAACAGCTGGAGGATGGCCGCACCCTGTCAGACTAC 171061655 Query 22396 AACATTCAAAAAGAATCCACC 22416 |||| || |||| ||| || Sbjct 171061654 GACATCCAGAAAGTGTCCTCC 171061634 >seq243 Length=111246239 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||||||||| || || ||| || ||| | || | | || Sbjct 82529383 ACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGAGACACCATTGAGAAAGTGAAGGCC 82529442 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| || || ||||| || || || | || ||||| | |||||| Sbjct 82529443 AAGATCCAAGACAAGGAAGGCATCCCACCTGACCAGCAGAGGCTGATATTCTCTGGCAAA 82529502 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 | | |||||| |||||| | || || |||||| || ||||| |||||| | ||| Sbjct 82529503 CGGCAGGAGGATGGCCGCACTCTGTCTGACAGCAACATCCAGAAAGAGTCCACCTTGCAT 82529562 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 | || ||||| ||||||| || Sbjct 82529563 CTGGTGCTGCGACTGCGCGGTGG 82529585 >seq117 Length=147991367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 22309 CAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTA 22368 ||||||||||| || || ||||| || || || | || ||||| || ||||||||||| Sbjct 30566820 CAAGACAAGGAAGGCATCCCACC-GACCAGCAGAG-CTGATATTCGCTGGCAAACAGTTG 30566763 Query 22369 GAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||||| || |||| | ||| | |||||||| || ||||| |||||| Sbjct 30566762 GAGGATGGCCACACCCTGTCCAACTACAACATCCAGAAAGAGTCCACC 30566715 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 22309 CAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTA 22368 ||||||||||| || || ||||| || || || | || ||||| || ||||||||||| Sbjct 30568678 CAAGACAAGGAAGGCATCCCACC-GACCAGCAGAG-CTGATATTCGCTGGCAAACAGTTG 30568621 Query 22369 GAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||||| || |||| | ||| | |||||||| || ||||| |||||| Sbjct 30568620 GAGGATGGCCACACCCTGTCCAACTACAACATCCAGAAAGAGTCCACC 30568573 >seq297 Length=62275575 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/201 (70%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | | || || || |||||||||| || || || Sbjct 30820143 AACATGCAGATCTTCGTGAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTCGAGTCC 30820084 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || |||| || || || |||| ||| | | ||| || || Sbjct 30820083 AGTGA--CCATCGAGAATGTCAAGGCCAAGATCCAGGACATGGAAG-TCGTCCCCCTGAC 30820027 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||||||||||||| | |||||| ||||||| | ||||| ||| Sbjct 30820026 CAGCAGAGACTGATCTTTGCCGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTAC 30819967 Query 22396 AACATTCAAAAAGAATCCACC 22416 |||| || | ||| |||||| Sbjct 30819966 AACACCCAGAGAGAGTCCACC 30819946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723114759575