Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq97 145 8e-30 seq232 136 4e-27 seq174 134 1e-26 seq219 131 2e-25 seq129 111 2e-19 seq206 109 5e-19 seq1 98.7 1e-15 seq312 91.5 1e-13 seq271 89.7 5e-13 seq55 86.0 6e-12 >seq97 Length=173707219 Score = 145 bits (160), Expect = 8e-30 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | || |||||| | ||||| |||||||||||| Sbjct 138042926 GTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 138042867 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || || ||||| || || || || ||| Sbjct 138042866 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 138042807 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| || | || | |||||||||||||| || Sbjct 138042806 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 138042747 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| ||||||||||| Sbjct 138042746 TTCACGAAGATTTGCATTTT 138042727 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | ||| ||||| ||||| | || || || |||||||||||||| || | Sbjct 138628758 CCACCACGAAGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 138628817 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | ||||| | |||||| || ||| | || | || |||||| || |||||| Sbjct 138628818 AAAGTACGGCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGA 138628877 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || || || || ||||||| || | || || || || || Sbjct 138628878 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACC 138628937 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || || | || || || ||||| ||||| Sbjct 138628938 TCGAGCGTGATGGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 138628984 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | ||| ||||| ||||| | || || || |||||||||||||| || | Sbjct 159895323 CCACCACGAAGTCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 159895264 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | ||||| |||||||| || ||| | || | || |||||| || |||||| Sbjct 159895263 AAAGTACGGCCATCTTCTAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGA 159895204 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACA 64369 ||||||| | || || || || ||||||| Sbjct 159895203 GTTCCTTCCTCATCCTGGATCTTGGCCTTTACA 159895171 >seq232 Length=115493446 Score = 136 bits (150), Expect = 4e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 64259 TGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGC 64318 || ||| ||||||| | || |||||| | ||||| ||||||||||||||| |||||||| Sbjct 36865994 TGGATGCTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATGAGC 36865935 Query 64319 CGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACT 64378 | ||||||||| || || || | || || || || || || ||| ||| ||| | Sbjct 36865934 CTCTGCTGGTCAGGGGGGATGCTCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATG 36865875 Query 64379 GTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATT 64438 || |||| || ||||| |||| || | |||||||||||||| || || ||||| ||| Sbjct 36865874 GTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATT 36865815 Query 64439 TGCATTTT 64446 |||||||| Sbjct 36865814 TGCATTTT 36865807 >seq174 Length=112626471 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | || |||||| | ||||| |||||||||||| Sbjct 48881710 GTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 48881651 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || || ||||| || || || || ||| Sbjct 48881650 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 48881591 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| || | || | |||||||||||||| || Sbjct 48881590 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 48881531 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 48881530 TTCACGAAGATCTGCAT 48881514 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || |||||| | ||||| |||||||||||| Sbjct 48881482 GTTGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 48881423 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || || ||||| || || || || ||| Sbjct 48881422 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 48881363 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| |||| || | |||||||||||||| || Sbjct 48881362 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTC 48881303 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 48881302 TTCACGAAGATCTGCAT 48881286 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | || |||||| | ||||| |||||||||||| Sbjct 49699226 GTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 49699285 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || || ||||| || || || || ||| Sbjct 49699286 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 49699345 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| || | || | |||||||||||||| || Sbjct 49699346 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 49699405 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || | | ||||||||| Sbjct 49699406 TTCACAGAGAATTGCATTTT 49699425 Score = 111 bits (122), Expect = 2e-19 Identities = 148/201 (74%), Gaps = 5/201 (2%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || |||||||| || | || |||||| | ||||| ||||||||||| Sbjct 48881031 GTTGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCC- 48880973 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || || |||| || | | || |||| Sbjct 48880972 GCAAAGATGAGCCTCTGCTGGTCAGG-GGGATGCCCTCTTAATCCGG--ATCTTGGCTTC 48880916 Query 64367 ACAACCTCCACTGTATCAC-CGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | || |||| || | |||| |||| || | ||||||||| |||| || Sbjct 48880915 ACGTTCTCGATGGTGTCACTGGGGGCCCACCTCTAGGGTGATGGTCTTGCCCGTCAGGGT 48880856 Query 64426 TTTTACGAAAATTTGCATTTT 64446 || ||||| ||||||||||| Sbjct 48880855 CTTCACGAAGATTTGCATTTT 48880835 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA-AGCTGCTT-GC 64304 || || ||||| ||| |||||||||| | || |||||| | ||||| |||||||| || Sbjct 48881257 GTTGACTCTTTCTGA-TGTTGTAATCAGAGAGGGTGCGGCCATCTTCGCAGCTGCTTTGC 48881199 Query 64305 CGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCT 64364 ||||| | || |||| ||||||||| | || || || |||| | || | | || || Sbjct 48881198 CGGCAAAGAT-AGCCTCTGCTGGTCATGGGGGATGCCCTCTTATCCTGGA--TCTTGGCC 48881142 Query 64365 TTACAACC--TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAA 64422 | || | | || || |||| || ||||| || | | | |||||||||||||| Sbjct 48881141 TCACTCACGTTTCATGGTGTCACTGGGCTCCACCTCCAGGATGATGGTCTTGCCGGTCAG 48881082 Query 64423 AGTTTTTACGAAAATTTGCAT 64443 || || |||| ||| ||||| Sbjct 48881081 GGTCTTCACGAGAATCTGCAT 48881061 >seq219 Length=114033958 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || ||||| || | || || | ||| || |||||||| || | || |||||| | ||| Sbjct 14315721 AGGACTAGGTGCAGGGTTGACTTTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 14315780 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||||||| | ||||||| ||||||||| || || || || || || || Sbjct 14315781 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 14315840 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || |||| || ||||| || | || | |||| Sbjct 14315841 TGGATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14315900 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||||||| || || ||||| ||||||||||| Sbjct 14315901 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 14315935 >seq129 Length=145729302 Score = 111 bits (122), Expect = 2e-19 Identities = 151/209 (72%), Gaps = 10/209 (5%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||| ||||| ||| | || |||||| | ||||| |||||||||| | Sbjct 132017369 GTTGACTCCTTCCGAACGTTGTGATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCGG 132017428 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGG-----AATTCCTTCTTTTTCTTGTATTTTTT 64361 ||| | ||||||| |||||||||||| || || || ||||| || || || || Sbjct 132017429 GCAAAGATGAGCCTCTGCTGGTCGGGGGGCGGGAGATGCCCTCTTTATCCTGGATCTTGG 132017488 Query 64362 GCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTA----CAGTTACGGTCTTGCCG 64417 ||| ||| ||| | || || | || |||||||||| | | | |||||||||| Sbjct 132017489 CCTTCACATTCTCGA-TGGTTCGCTGGGTTCCACTTCTAGGGCGATTGATGGTCTTGCCG 132017547 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||| || || ||||| ||||||||||| Sbjct 132017548 GTCAGGGTCTTCACGAAGATTTGCATTTT 132017576 >seq206 Length=52716770 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || ||||||||||||| | |||||| | || Sbjct 36641119 AAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGACAGGGTGCGGCCATC 36641060 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 36641059 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36641000 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || |||| || || || || | || | ||| Sbjct 36640999 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36640940 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || || || || ||||| Sbjct 36640939 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640907 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || |||||||| |||| | |||||| | || Sbjct 36640435 AAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATC 36640376 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 36640375 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36640316 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || |||| || || || || | || | ||| Sbjct 36640315 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36640256 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| || || || ||||| || || || |||||| Sbjct 36640255 CTTACCAGTTAAGGTTTTCACAAAGATCTGCATT 36640222 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || |||||||| |||| | |||||| | || Sbjct 36640663 AAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATC 36640604 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 36640603 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36640544 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || |||| || || || || | || | ||| Sbjct 36640543 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36640484 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || || || || ||||| Sbjct 36640483 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640451 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || |||||||| |||| | |||||| | || Sbjct 36640891 AAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATC 36640832 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 36640831 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36640772 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || |||| || || || || | || | ||| Sbjct 36640771 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36640712 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || || || || ||||| Sbjct 36640711 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640679 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || |||||||| |||| | |||||| | || Sbjct 36641347 AAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATC 36641288 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 36641287 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36641228 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || |||| || || || || | || | ||| Sbjct 36641227 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36641168 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || || || || ||||| Sbjct 36641167 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641135 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || |||||||| |||| | |||||| | || Sbjct 36641803 AAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATC 36641744 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 36641743 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36641684 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || |||| || || || || | || | ||| Sbjct 36641683 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36641624 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || || || || ||||| Sbjct 36641623 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641591 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || |||||||| |||| | |||||| | || Sbjct 36642259 AAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATC 36642200 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 36642199 TTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 36642140 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || |||| || || || || | || | ||| Sbjct 36642139 CTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGT 36642080 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || || || || ||||| Sbjct 36642079 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642047 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| |||| | |||||| | ||||| ||||||||||| Sbjct 36642471 GTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCT 36642412 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || || || || || || ||| ||| Sbjct 36642411 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTG 36642352 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || || || || | || | ||||||||| |||| || Sbjct 36642351 ACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTC 36642292 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 36642291 TTCACAAAGATCTGCAT 36642275 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| ||||||||||| Sbjct 36641559 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCT 36641500 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || || || || || || ||| ||| Sbjct 36641499 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTG 36641440 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || || || || | || | ||||||||| |||| || Sbjct 36641439 ACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTC 36641380 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 36641379 TTCACAAAGATCTGCAT 36641363 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| ||||||||||| Sbjct 36642015 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCT 36641956 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || || || || || || ||| ||| Sbjct 36641955 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTG 36641896 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || || || || | || | ||||||||| |||| || Sbjct 36641895 ACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTC 36641836 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 36641835 TTCACAAAGATCTGCAT 36641819 >seq1 Length=282763074 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64250 GATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCA 64309 || ||||| || ||||||| ||| | | ||| || | ||||| ||||||||||| ||| Sbjct 220631907 GACTCTTTCTGGATGTTGTGATCAGAAAGAGTGGGC-CATCTTCCAGCTGCTTGCCTGCA 220631849 Query 64310 TAAATGAGCCGCTGCTGGTCG-GGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTAC 64368 | |||||| |||||| | || ||| | || ||||| | || || || |||| | Sbjct 220631848 AAGGTGAGCCTCTGCTGTTGTTGGTGGAGTGCCCTCTTTATTCTGGATCTTGGGCTTCAT 220631789 Query 64369 AACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTT 64428 | ||| | || |||| || |||| ||||| || | |||||||| ||||| || || Sbjct 220631788 GATCTCAATGGTGTCACTGGGCTCCAATTCTAGGGTGATGGTCTTGCTGGTCAGGGTCTT 220631729 Query 64429 TACGAAAATTTGCATTTT 64446 || || ||||||||||| Sbjct 220631728 CACAAAGATTTGCATTTT 220631711 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| ||||| ||||| | || || || |||||||||||||| || | | || || | Sbjct 255573162 TCTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCC 255573221 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 |||| |||||||| || ||| | | | || |||||| || |||||| || |||| || Sbjct 255573222 ACCTTCCAGCTGCTTACCAGCAAAGACCAACCTCTGCTGATCAGGAGGAGTTTCTTCCTT 255573281 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| || | || || || || ||||| | || | Sbjct 255573282 ATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACTTCGAGCGTGAT 255573341 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || || | || || || ||||| ||||| Sbjct 255573342 GGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 255573377 >seq312 Length=159970021 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/200 (71%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | || |||| | | ||||| ||||||||||| Sbjct 54028850 GTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGTGGCCATCTTCCAGCTGCTTGCCT 54028909 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || || ||||| || || || || || Sbjct 54028910 GCAAAGATGAGCCTCTGCTGGTCAGG-GGGATACCCTCTTTATCCTGGATCTTGGCATTC 54028968 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 | ||| | || ||| || ||||| || | || | | |||||| ||||| || Sbjct 54028969 ATGTTCTCGATGGTGTCATTGGGCTCCACCTCCAGGGTGATGATCTTGCTGGTCAGGGTC 54029028 Query 64427 TTTACGAAAATTTGCATTTT 64446 || | ||| || || |||| Sbjct 54029029 TTCAAGAAGATCTGTTTTTT 54029048 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| ||||| ||||| | | | || || |||||||||||||| || | | || || | Sbjct 37026620 TCTCAGCACGAGATGGAGCATGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCC 37026561 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| |||||||| || ||| | | | || |||||| || |||||||||||||| | Sbjct 37026560 ATCTTCTAGCTGCTTACCAGCAAAGACCAACCTCTGCTGATCAGGAGGAATTCCTTCCTC 37026501 Query 64348 TTCTTGTATTTTTTGCTTTACA 64369 || || || || ||||||| Sbjct 37026500 ATCCTGGATCTTGGCCTTTACA 37026479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| ||||| ||||| | | | || || |||||||||||||| || | | || || | Sbjct 72456624 TCTCAGCACCAGATGGAGCATGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCC 72456683 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| ||||||| || ||| | || | || ||||| || |||||||||||||| | Sbjct 72456684 ATCTTCCAGCTGCTCACCAGCAAAGATCAACCTCTGCTCATCAGGAGGAATTCCTTCCTC 72456743 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| || | || || || || | || | || | Sbjct 72456744 ATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAGCCTCGAGCGTGAG 72456803 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || || | || || || ||||| ||||| Sbjct 72456804 GGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 72456839 >seq271 Length=90843779 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| ||||| ||||| | ||| || || |||||||||||||| || | | | || | Sbjct 5163295 TCTCAGCACGAGATGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGCACGGCC 5163236 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 |||||| || ||||| || || | | |||| ||||||||| |||||||||||||| | Sbjct 5163235 GTCTTCCAGTTGCTTACCAGCCAAGACCAGCCTCTGCTGGTCAGGAGGAATTCCTTCCTC 5163176 Query 64348 TTCTTGTATTTTTTGCTTTACA 64369 || || || || ||||||| Sbjct 5163175 ATCCTGGATCTTGGCCTTTACA 5163154 >seq55 Length=177699992 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| ||||| | || || || |||||||||||||| |||| || | || | Sbjct 38853847 CTCAGCACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCTG--ACAATACGGCCA 38853904 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| ||||||| || ||| | || | || ||||| || |||||||||||||| || Sbjct 38853905 TCTTCTGGCTGCTTACCAGCAAAGATCAACCTTTGCTGATCAGGAGGAATTCCTTCCTTA 38853964 Query 64349 TCTTGTATTTTTTGCTTTACA 64369 || || || || ||||||| Sbjct 38853965 TCCTGGATCTTGGCCTTTACA 38853985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638835490200