Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq206 138 1e-27 seq97 125 8e-24 seq232 123 3e-23 seq219 122 1e-22 seq174 120 3e-22 seq297 113 5e-20 seq243 100 3e-16 seq154 86.0 7e-12 seq129 82.4 9e-11 >seq206 Length=52716770 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | || | ||||| ||||| || |||||| ||||| |||||||| | Sbjct 36640679 TGCCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTG 36640620 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36640619 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36640560 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36640559 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36640500 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36640499 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640451 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | || | ||||| ||||| || |||||| ||||| |||||||| | Sbjct 36640907 TGCCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTG 36640848 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36640847 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36640788 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36640787 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36640728 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36640727 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640679 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | |||| ||||| |||| || |||||| ||||| |||||||| | Sbjct 36641591 TGCCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 36641532 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36641531 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36641472 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36641471 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36641412 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36641411 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641363 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | || | ||||| ||||| || |||||| ||||| |||||||| | Sbjct 36641819 TGCCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTG 36641760 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36641759 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36641700 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36641699 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36641640 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36641639 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641591 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | |||| ||||| |||| || |||||| ||||| |||||||| | Sbjct 36642047 TGCCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 36641988 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36641987 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36641928 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36641927 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36641868 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36641867 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641819 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | |||| ||||| |||| || |||||| ||||| |||||||| | Sbjct 36642503 TGCCCCCTCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTG 36642444 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36642443 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36642384 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36642383 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36642324 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36642323 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642275 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | || | ||||| |||| || |||||| ||||| |||||||| | Sbjct 36641363 TGCCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTG 36641304 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36641303 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36641244 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36641243 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36641184 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36641183 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36641135 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | || | ||||| |||| || |||||| ||||| |||||||| | Sbjct 36642275 TGCCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTG 36642216 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36642215 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36642156 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36642155 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36642096 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36642095 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36642047 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | || | ||||| ||||| || |||||| ||||| |||||||| | Sbjct 36640451 TGCCCCCTCTGAGGCGAAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTG 36640392 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36640391 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36640332 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36640331 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36640272 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 | |||| |||||||| || || || | ||||| |||||||| |||||| Sbjct 36640271 CCTCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCATT 36640222 Score = 129 bits (142), Expect = 7e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | || | ||||| |||| || |||||| ||||| ||||| || | Sbjct 36641135 TGCCCCCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTG 36641076 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 36641075 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 36641016 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | ||||| || | || | Sbjct 36641015 GGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGTGTCACTGGGCTCGA 36640956 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 36640955 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 36640907 >seq97 Length=173707219 Score = 125 bits (138), Expect = 8e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || || | || | ||||| |||| || ||| || ||||| |||| Sbjct 138042964 ATTAATAGCCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGT 138042905 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | || || || ||||| | || || |||||||||||||| || || | | |||||||| Sbjct 138042904 AATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGT 138042845 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || ||| || ||| |||||| ||| | || | | ||||| || | Sbjct 138042844 CAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGG 138042785 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| |||| |||||||| ||||| ||||| || || || ||||||||||||||| Sbjct 138042784 GCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 138042726 >seq232 Length=115493446 Score = 123 bits (136), Expect = 3e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || ||||| ||||| |||| || || || ||||| | || || Sbjct 36866018 ACCAGGTGCAGGGTTGACTCCTCCTGGATGCTGTAATCAGAGAGGGTGCGGCCATCTTCC 36865959 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||||| || || | | ||||||||| | || | ||||||||| ||| | Sbjct 36865958 AGCTGCTTGCCGGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCTCTCCTTATCCTGG 36865899 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | || | | ||||| || | ||||| || | |||||||| ||| Sbjct 36865898 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTG 36865839 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || ||||| || || || ||||||||||||||| Sbjct 36865838 CCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 36865806 >seq219 Length=114033958 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46406 TTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 46465 || ||||| |||||||| || || ||||| | || || |||||||||||||| || || Sbjct 14315745 TTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATG 14315804 Query 46466 AAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC 46525 | | ||||||||| | || | || |||||| ||| |||||| ||| | || Sbjct 14315805 AGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTCTTG 14315864 Query 46526 ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAG 46585 | ||||| || | ||||| |||| |||||||| ||||| ||||| || || || ||| Sbjct 14315865 ATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAG 14315924 Query 46586 ATTTGCATTTTG 46597 |||||||||||| Sbjct 14315925 ATTTGCATTTTG 14315936 >seq174 Length=112626471 Score = 120 bits (132), Expect = 3e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || || | || | ||||| |||| || ||| || ||||| |||| Sbjct 49699188 ATTAATAGCCGCCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGT 49699247 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | || || || ||||| | || || |||||||||||||| || || | | |||||||| Sbjct 49699248 AATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGT 49699307 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || ||| || ||| |||||| ||| | || | | ||||| || | Sbjct 49699308 CAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGG 49699367 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| |||| |||||||| ||||| ||||| || || ||| ||| |||||||||| Sbjct 49699368 GCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAGAGAATTGCATTTTG 49699426 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || |||||| ||||| |||||||| || || ||||| | || || Sbjct 48881494 ACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 48881435 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||||| || || | | ||||||||| | || | || ||| || ||| | Sbjct 48881434 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGG 48881375 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | || | | ||||| || | ||||| || | |||||||| ||| Sbjct 48881374 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTG 48881315 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || ||||| ||||| Sbjct 48881314 CCGGTCAGGGTCTTCACGAAGATCTGCAT 48881286 Score = 113 bits (124), Expect = 5e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || || | || | ||||| |||| || ||| || ||||| |||| Sbjct 48881748 ATTAATAGCCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGT 48881689 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | || || || ||||| | || || |||||||||||||| || || | | |||||||| Sbjct 48881688 AATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGT 48881629 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || ||| || ||| |||||| ||| | || | | ||||| || | Sbjct 48881628 CAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGG 48881569 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||| |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 48881568 GCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 48881514 Score = 93.3 bits (102), Expect = 5e-14 Identities = 153/214 (71%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || ||| || ||||| |||||||| || || ||||| | || || Sbjct 48881043 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 48880984 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||| | || || | | ||||||||| | || | || ||| | ||| | Sbjct 48880983 AGCTGCTTGCCG-CAAAGATGAGCCTCTGCTGGTCAGGGGG-ATGCCCTCTTAATCCG-G 48880927 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC-ACATCCACCGTGATGGTTTT 46563 ||||| ||| | || | | ||||| || | || || || | |||||||| || Sbjct 48880926 ATCTTGG-CTTCACGTTCTCGATGGTGTCACTGGGGGCCCACCTCTAGGGTGATGGTCTT 48880868 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||||||| || || || ||||||||||||||| Sbjct 48880867 GCCCGTCAGGGTCTTCACGAAGATTTGCATTTTG 48880834 >seq297 Length=62275575 Score = 113 bits (124), Expect = 5e-20 Identities = 161/223 (72%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAA---TGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCG 46434 ||||| |||||| ||||| || |||||| | ||| | ||||||||||| || ||||| Sbjct 30819927 ACGCAGCACCAGGTGCAAGGGTGGACTCTC--TCTGGGTGTTGTAGTCGGACAGGGTGCG 30819984 Query 46435 CTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTC 46494 | || || ||||| |||||||| || |||| | ||||||||| | || ||| || Sbjct 30819985 GCCATCCTCCAGCTGTTTGCCGGCAAAGATCAGTCTCTGCTGGTCAG-GGGGACGACTTC 30820043 Query 46495 CTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGT 46554 | ||||| |||||| ||||| || | | ||| || || || || || | || Sbjct 30820044 CATGTCCTGGATCTTGGCCTTGACATTCTCGA--TGGTCACTGGACTCGACCTCAAGAGT 30820101 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||||| |||||| |||| || || || ||||| ||||| ||| Sbjct 30820102 GATGGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATGTTG 30820144 >seq243 Length=111246239 Score = 100 bits (110), Expect = 3e-16 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||||||||| || ||| || ||||| ||| ||| || |||||||| | Sbjct 82529573 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGCTGTCAGACAGAGTGCGGCCA 82529514 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || || | ||||| | |||||||| | ||||||||| | || | || |||||| Sbjct 82529513 TCCTCCTGCCGTTTGCCAGAGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTG 82529454 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 || |||||| ||| | || | | ||||| || | || || || | |||||| Sbjct 82529453 TCTTGGATCTTGGCCTTCACTTTCTCAATGGTGTCTCTGGGCTCGACCTCAAGAGTGATG 82529394 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCA 46592 || |||||||||| || || || |||| |||| Sbjct 82529393 GTCTTGCCCGTCA--GTCTTCACGAAGAACTGCA 82529362 >seq154 Length=133307652 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||| || ||| | ||| ||| || ||||| ||||||||||| || ||| | | Sbjct 35423270 ACGCAACACTAGGTGCCAGGTAGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGTGGCC 35423329 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| |||| ||||||||||| | ||| ||||| | || | | ||||| Sbjct 35423330 TTCCTCTAGCTGTTTGCTGGCGAATATCAGCCTCTGTTGGTCTGGTGGGATTCCTTCCTT 35423389 Query 46498 GTCCATGATCTTCTTCTTGA 46517 ||| |||||| ||||| Sbjct 35423390 GTCTTGGATCTTGGCCTTGA 35423409 >seq129 Length=145729302 Score = 82.4 bits (90), Expect = 9e-11 Identities = 168/248 (68%), Gaps = 10/248 (4%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || || | || | ||||| ||| || |||||| | | |||| Sbjct 132017331 ATTAGTAGCCACCCCTCAGGCGGAGGACCAGGCGCAGGGTTGACTCCTTCCGAACGTTGT 132017390 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 || || || ||||| | || || |||||||||| ||| || || | | |||||||| Sbjct 132017391 GATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCGGGCAAAGATGAGCCTCTGCTGGT 132017450 Query 46479 CGGCCGGC-----ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC 46533 ||| ||| | || ||| || ||| |||||| ||| | || | | || || Sbjct 132017451 CGGGGGGCGGGAGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGT-TC 132017509 Query 46534 GCTCGATTCCACATCCACCG----TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTT 46589 ||| | |||||| || | | ||||||| ||||| ||||| || || || ||||||| Sbjct 132017510 GCTGGGTTCCACTTCTAGGGCGATTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTT 132017569 Query 46590 GCATTTTG 46597 |||||||| Sbjct 132017570 GCATTTTG 132017577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231652466600